C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: synaptopodin 2
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000184590 Synpo2-006 ENSMUSG00000050315 10090 - 3:123108750-123112978 processed_transcript

Mus musculus EnsemblGRCm38

Genome
Exciting message
Genes
Structures from Ensembl
Connecting
Transcripts
Structures from Ensembl
Connecting
Powered by Dalliance 0.11.11

Expression Patterns

Heat Map
Numeric Values
Transcript'; LiverPlacentaTestisENSMUST00000184590
Transcript ID Liver Placenta Testis
ENSMUST00000184590 0.035±0.00 1.252±0.00 0.587±0.29

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00005O CIL_00005O_0003 CGP 3:123006206-123236149
CIL_0005EP CIL_0005EP_0002 CGP 3:123076519-123365635

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000307142 SYNPO2-001 protein_coding Homo_sapiens 0 547
ENST00000429713 SYNPO2-003 protein_coding Homo_sapiens 0 547
ENST00000434046 SYNPO2-002 protein_coding Homo_sapiens 0 551
ENST00000504178 SYNPO2-004 protein_coding Homo_sapiens 0 387
ENST00000610556 SYNPO2-202 protein_coding Homo_sapiens 0 547

Loading