C-It-Loci: A knowledge database for tissue-enriched loci.
Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main
Transcript Info |
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| Description: | collagen, type III, alpha 1 | |||||
|---|---|---|---|---|---|---|
| Transcript Accession | Transcript Name | Contained in Gene | Tax ID | Strand | Position | Biotype |
ENSMUST00000186021  |
Col3a1-007 |
ENSMUSG00000026043 |
10090 | + |
1:45339958-45347766  |
protein_coding |
Expression PatternsNo expression data. |
Conserved Regions | |||
|---|---|---|---|
| Region ID | Sub-Region | Region Type | Position |
| CIL_0004J6 | CIL_0004J6_0002 | CGP | 1:45311538-45503282 |
Gene Ontology | ||
|---|---|---|
| GO ID | Evidence Type | GO Description |
| No GO terms available. | ||
Homologs | |||||
| ENSEMBL Accession | Gene Name | Biotype | Species | E-Value | Bit Score |
|
ENSDART00000009393
|
col1a1a-001 | protein_coding | Danio_rerio | 0.0000000000008 | 79 |
|
ENSDART00000047010
|
col1a1a-201 | protein_coding | Danio_rerio | 0.00000000004 | 73 |
|
ENSDART00000140586
|
col1a1a-002 | processed_transcript | Danio_rerio | 0.00000000004 | 73 |
|
ENST00000304636
|
COL3A1-001 | protein_coding | Homo_sapiens | 0 | 773 |
|
ENST00000317840
|
COL3A1-201 | protein_coding | Homo_sapiens | 0 | 773 |
|
ENST00000487010
|
COL3A1-002 | retained_intron | Homo_sapiens | 0 | 556 |
