C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: protein tyrosine phosphatase, receptor type, f polypeptide (PTPRF), interacting protein (liprin), alpha 4
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000186730 Ppfia4-007 ENSMUSG00000026458 10090 - 1:134296784-134327266 protein_coding

Mus musculus EnsemblGRCm38

Genome
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Genes
Structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; BladderColonKidneyLiverMuscleOvaryPlacentaTestisENSMUST00000186730
Transcript ID Bladder Colon Kidney Liver Muscle Ovary Placenta Testis
ENSMUST00000186730 0.459±0.09 0.227±0.08 0.097±0.00 0.134±0.00 0.095±0.00 0.488±0.00 0.567±0.08 0.729±0.23

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000272198 PPFIA4-002 protein_coding Homo_sapiens 0 1738
ENST00000295706 PPFIA4-201 protein_coding Homo_sapiens 0 3009
ENST00000367240 PPFIA4-001 protein_coding Homo_sapiens 0 2579
ENST00000447715 PPFIA4-005 protein_coding Homo_sapiens 0 1445
ENST00000486360 PPFIA4-003 retained_intron Homo_sapiens 0 891
ENST00000594656 PPFIA4-011 retained_intron Homo_sapiens 0 357
ENST00000597023 PPFIA4-010 retained_intron Homo_sapiens 0 350
ENST00000599514 PPFIA4-007 protein_coding Homo_sapiens 0 556
ENST00000599966 PPFIA4-008 protein_coding Homo_sapiens 0 2856
ENST00000600426 PPFIA4-004 protein_coding Homo_sapiens 0 1892
ENST00000600447 PPFIA4-006 retained_intron Homo_sapiens 0 344

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