C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: fibronectin 1
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000187627 Fn1-017 ENSMUSG00000026193 10090 - 1:71590097-71600368 nonsense_mediated_decay

Expression Patterns

Heat Map
Numeric Values
Transcript'; BrainOvaryPlacentaTestisENSMUST00000187627
Transcript ID Brain Ovary Placenta Testis
ENSMUST00000187627 16.570±0.00 129.658±0.00 1731.364±1097.51 6.311±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0005MI CIL_0005MI_0002 CGP 1:71557150-71653200
CIL_0005MJ CIL_0005MJ_0002 CGP 1:71585520-72212307

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000323926 FN1-002 protein_coding Homo_sapiens 0 693
ENST00000336916 FN1-003 protein_coding Homo_sapiens 0 693
ENST00000354785 FN1-001 protein_coding Homo_sapiens 0 693
ENST00000356005 FN1-013 protein_coding Homo_sapiens 0 693
ENST00000357867 FN1-004 protein_coding Homo_sapiens 0 529
ENST00000359671 FN1-201 protein_coding Homo_sapiens 0 693
ENST00000421182 FN1-005 protein_coding Homo_sapiens 0 529
ENST00000432072 FN1-012 protein_coding Homo_sapiens 0 529
ENST00000438981 FN1-026 protein_coding Homo_sapiens 0 411
ENST00000443816 FN1-009 protein_coding Homo_sapiens 0 693
ENST00000446046 FN1-008 protein_coding Homo_sapiens 0 529
ENST00000456923 FN1-011 protein_coding Homo_sapiens 0 693
ENST00000460217 FN1-025 retained_intron Homo_sapiens 0 460
ENST00000461974 FN1-022 retained_intron Homo_sapiens 3e-40 169
ENST00000485567 FN1-023 retained_intron Homo_sapiens 3e-40 169
ENST00000492816 FN1-007 retained_intron Homo_sapiens 0 693

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