C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_0005MI_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000138363-ENSG00000115414 CGP 9606 2:215311817-215436172
GeneTranscriptPositionBiotype
ENSG00000115414 (FN1)
fibronectin 1 		ENST00000323926 (FN1-002) 215360454-215436068 protein_coding
ENST00000336916 (FN1-003) 215360454-215436068 protein_coding
ENST00000354785 (FN1-001) 215360454-215436172 protein_coding
ENST00000356005 (FN1-013) 215360866-215436068 protein_coding
ENST00000357867 (FN1-004) 215360454-215436068 protein_coding
ENST00000359671 (FN1-201) 215360458-215436068 protein_coding
ENST00000421182 (FN1-005) 215360440-215436067 protein_coding
ENST00000426059 (FN1-014) 215414661-215436073 protein_coding
ENST00000432072 (FN1-012) 215360865-215436067 protein_coding
ENST00000438981 (FN1-026) 215371909-215375689 protein_coding
ENST00000443816 (FN1-009) 215360862-215436073 protein_coding
ENST00000446046 (FN1-008) 215360862-215436068 protein_coding
ENST00000456923 (FN1-011) 215361147-215393147 protein_coding
ENST00000460217 (FN1-025) 215371864-215375725 retained_intron
ENST00000461974 (FN1-022) 215370343-215372482 retained_intron
ENST00000469569 (FN1-018) 215364370-215365517 retained_intron
ENST00000471193 (FN1-031) 215408319-215409950 retained_intron
ENST00000473614 (FN1-019) 215364667-215365753 retained_intron
ENST00000474036 (FN1-027) 215375633-215381329 retained_intron
ENST00000480024 (FN1-021) 215367679-215370520 retained_intron
ENST00000480737 (FN1-024) 215382159-215384080 retained_intron
ENST00000485567 (FN1-023) 215370380-215372439 retained_intron
ENST00000490833 (FN1-028) 215379205-215383483 processed_transcript
ENST00000492816 (FN1-007) 215360862-215393721 retained_intron
ENST00000494446 (FN1-017) 215361341-215365676 retained_intron
ENST00000496542 (FN1-032) 215419289-215421270 retained_intron
ENST00000498719 (FN1-010) 215360866-215363640 retained_intron
ENSG00000138363 (ATIC)
5-aminoimidazole-4-carboxamide ribonucleotide formyltransferase/IMP cyclohydrolase 		ENST00000236959 (ATIC-001) 215311817-215349763 protein_coding
ENST00000413174 (ATIC-009) 215312498-215326978 protein_coding
ENST00000426233 (ATIC-013) 215336022-215349298 protein_coding
ENST00000427397 (ATIC-008) 215312130-215335004 nonsense_mediated_decay
ENST00000435675 (ATIC-007) 215312091-215349763 protein_coding
ENST00000442048 (ATIC-015) 215348684-215349773 protein_coding
ENST00000443953 (ATIC-002) 215312072-215349763 nonsense_mediated_decay
ENST00000444305 (ATIC-004) 215311956-215326056 nonsense_mediated_decay
ENST00000446622 (ATIC-012) 215334917-215347652 protein_coding
ENST00000459796 (ATIC-011) 215338870-215345587 retained_intron
ENST00000467388 (ATIC-014) 215338769-215347240 retained_intron
ENST00000478734 (ATIC-003) 215348985-215349756 retained_intron
ENST00000479093 (ATIC-016) 215338766-215349733 retained_intron
ENST00000488712 (ATIC-006) 215311992-215326139 retained_intron

Homo sapiens Ensembl (GRCh38)

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CIL_0005MI_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000026192-ENSMUSG00000026193 CGP 10090 1:71557150-71653200
GeneTranscriptPositionBiotype
ENSMUSG00000026192 (Atic)
5-aminoimidazole-4-carboxamide ribonucleotide formyltransferase/IMP cyclohydrolase 		ENSMUST00000027384 (Atic-001) 71557150-71579631 protein_coding
ENSMUST00000136443 (Atic-003) 71557213-71563198 retained_intron
ENSMUST00000148077 (Atic-002) 71557179-71563198 retained_intron
ENSMUST00000154855 (Atic-005) 71568866-71572960 retained_intron
ENSMUST00000155769 (Atic-004) 71557179-71573363 retained_intron
ENSMUST00000187982 (Atic-006) 71557179-71559951 retained_intron
ENSMUSG00000026193 (Fn1)
fibronectin 1 		ENSMUST00000055226 (Fn1-001) 71585524-71653175 protein_coding
ENSMUST00000185408 (Fn1-012) 71585526-71609567 retained_intron
ENSMUST00000186129 (Fn1-002) 71585524-71653200 protein_coding
ENSMUST00000186575 (Fn1-018) 71586861-71591071 retained_intron
ENSMUST00000186613 (Fn1-014) 71629457-71641288 nonsense_mediated_decay
ENSMUST00000186736 (Fn1-013) 71645643-71653172 protein_coding
ENSMUST00000186879 (Fn1-009) 71644477-71653172 retained_intron
ENSMUST00000186940 (Fn1-010) 71642825-71653161 protein_coding
ENSMUST00000186985 (Fn1-016) 71598360-71602376 nonsense_mediated_decay
ENSMUST00000187627 (Fn1-017) 71590097-71600368 nonsense_mediated_decay
ENSMUST00000187938 (Fn1-007) 71585523-71653172 protein_coding
ENSMUST00000188092 (Fn1-015) 71600387-71602844 retained_intron
ENSMUST00000188674 (Fn1-005) 71585523-71653172 protein_coding
ENSMUST00000188894 (Fn1-003) 71585520-71653172 protein_coding
ENSMUST00000189160 (Fn1-011) 71604097-71624344 retained_intron
ENSMUST00000189821 (Fn1-006) 71585523-71653172 protein_coding
ENSMUST00000190780 (Fn1-008) 71585524-71653172 protein_coding

Mus musculus Ensembl (GRCm38)

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Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestis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
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0005MI_0001ENSG00000115414ENST00000323926ENST00000356005ENST00000357867ENST00000426059ENST00000432072ENST00000443816ENST00000446046ENST00000456923ENSG00000138363ENST00000236959ENST00000426233ENST00000435675ENST00000443953ENST00000446622ENST00000467388ENST00000478734ENST00000479093CIL_0005MI_0002ENSMUSG00000026192ENSMUST00000027384ENSMUST00000155769ENSMUSG00000026193ENSMUST00000055226ENSMUST00000185408ENSMUST00000186129ENSMUST00000186940ENSMUST00000186985ENSMUST00000187627ENSMUST00000187938ENSMUST00000188894ENSMUST00000189160ENSMUST00000189821ENSMUST00000190780
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000115414 ENST00000323926 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 13.348±0.00 N/A N/A
ENST00000336916 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000354785 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000356005 N/A N/A 6.026±0.00 N/A 12.821±0.00 15.393±0.00 5.751±0.00 N/A 48.115±0.00 42.450±0.00 N/A 30.409±0.00 N/A N/A
ENST00000357867 N/A N/A N/A N/A N/A N/A N/A 98.142±0.00 N/A N/A N/A N/A N/A N/A
ENST00000359671 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000421182 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000426059 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 22.357±0.00 N/A 4.815±0.00
ENST00000432072 N/A N/A N/A N/A N/A N/A 5.057±0.00 5.671±0.00 N/A N/A N/A 17.362±0.38 532.882±345.76 N/A
ENST00000438981 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000443816 23.409±0.00 5.381±0.00 5.593±0.00 7.898±4.81 25.958±2.62 20.418±0.00 11.053±4.56 371.944±0.00 49.848±0.16 85.582±23.06 5.022±0.44 N/A 684.662±518.11 31.009±0.00
ENST00000446046 12.563±0.00 15.248±0.00 N/A 5.434±4.30 14.160±2.10 29.961±20.23 10.041±0.00 17.150±0.00 41.913±3.03 101.636±79.13 N/A 27.257±12.63 1170.402±605.46 8.003±6.19
ENST00000456923 18.572±0.00 18.413±0.00 N/A 2.637±0.00 28.653±0.00 69.468±0.00 17.078±0.00 22.346±0.00 89.263±0.00 254.989±0.00 3.477±0.25 71.709±43.96 2232.314±1116.58 17.480±9.74
ENST00000460217 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000461974 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000469569 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000471193 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000473614 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000474036 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000480024 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000480737 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000485567 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000490833 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000492816 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000494446 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000496542 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000498719 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000138363 ENST00000236959 8.077±0.00 9.280±0.00 N/A 0.294±0.00 7.895±0.00 4.491±0.00 2.435±1.92 4.240±2.39 5.645±0.00 3.810±0.00 15.723±0.00 13.943±1.07 21.542±6.97 7.042±0.00
ENST00000413174 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000426233 N/A N/A N/A N/A 1.444±0.00 N/A N/A N/A N/A 2.081±0.00 N/A N/A N/A N/A
ENST00000427397 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000435675 N/A N/A N/A N/A 1.145±0.00 0.813±0.00 2.080±0.00 N/A N/A N/A 3.732±0.00 4.219±0.00 4.420±0.00 N/A
ENST00000442048 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000443953 8.163±0.00 13.302±0.00 N/A 20.954±0.00 10.991±0.00 6.616±0.00 7.568±0.00 11.988±0.00 8.222±0.00 3.175±0.00 4.070±0.00 5.178±0.95 6.367±0.00 23.050±0.00
ENST00000444305 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000446622 N/A N/A N/A 1.601±0.00 N/A N/A N/A N/A N/A N/A N/A 4.596±0.00 N/A N/A
ENST00000459796 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000467388 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 4.485±0.00 N/A N/A
ENST00000478734 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 5.531±0.00 N/A N/A N/A
ENST00000479093 N/A 21.997±0.00 N/A 8.002±6.73 3.799±0.00 13.075±0.00 N/A 10.847±8.25 7.844±5.52 3.483±0.00 N/A 57.150±35.53 43.771±33.47 27.363±6.42
ENST00000488712 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000026192 ENSMUST00000027384 15.931±3.25 5.752±0.91 17.709±2.02 10.660±2.03 8.802±1.33 9.311±0.94 6.421±0.31 7.842±1.34 15.156±10.87 6.778±1.02 7.478±1.46 14.207±4.11 21.897±12.47 3.018±0.41
ENSMUST00000136443 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000148077 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000154855 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000155769 9.845±3.93 21.096±2.91 N/A N/A 11.150±3.27 10.385±1.61 2.301±0.32 3.133±0.68 3.432±2.09 4.353±0.91 N/A 23.582±2.69 N/A 1.293±0.40
ENSMUST00000187982 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUSG00000026193 ENSMUST00000055226 38.464±27.25 1.489±0.32 30.810±3.31 13.504±1.71 37.106±7.22 14.402±1.17 N/A N/A 9.095±2.31 N/A N/A 20.011±4.72 39.445±0.00 1.085±0.34
ENSMUST00000185408 32.189±4.13 N/A 80.353±25.22 7.269±0.00 N/A N/A N/A N/A 13.682±3.60 N/A 1.572±0.02 15.741±0.00 179.599±0.00 N/A
ENSMUST00000186129 47.068±0.92 N/A 82.297±12.50 4.165±0.00 96.936±9.39 24.483±4.52 7.093±0.98 7.578±0.99 48.955±50.26 24.380±1.23 2.208±0.58 16.396±3.19 N/A 1.325±0.04
ENSMUST00000186575 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000186613 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000186736 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000186879 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000186940 N/A N/A N/A 13.920±0.00 N/A N/A N/A N/A N/A N/A N/A 80.870±0.00 497.828±0.00 4.301±0.00
ENSMUST00000186985 N/A 16.150±3.38 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000187627 N/A N/A N/A 16.570±0.00 N/A N/A N/A N/A N/A N/A N/A 129.658±0.00 1731.364±1097.51 6.311±0.00
ENSMUST00000187938 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 167.935±116.02 N/A
ENSMUST00000188092 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000188674 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000188894 59.108±46.91 1.855±0.47 47.266±7.63 4.109±0.00 N/A 18.969±2.45 2.326±0.53 5.694±1.27 N/A 16.969±3.41 N/A 32.029±9.58 186.321±137.11 2.478±1.07
ENSMUST00000189160 N/A 4.045±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000189821 N/A 3.059±0.85 N/A N/A N/A N/A N/A N/A 77.149±33.75 N/A N/A N/A 236.784±6.74 0.366±0.00
ENSMUST00000190780 29.107±10.03 2.706±0.55 N/A 2.105±0.00 45.533±10.04 16.301±1.79 3.815±0.76 3.410±0.46 59.837±40.98 20.545±2.92 1.679±0.20 14.442±2.93 202.140±214.32 0.642±0.07

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