C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: NOP58 ribonucleoprotein
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000188390 Nop58-013 ENSMUSG00000026020 10090 + 1:59704709-59711280 protein_coding

Mus musculus EnsemblGRCm38

Genome
Exciting message
Genes
Structures from Ensembl
Connecting
Transcripts
Structures from Ensembl
Connecting
Powered by Dalliance 0.11.11

Expression Patterns

Heat Map
Numeric Values
Transcript'; BrainOvaryPlacentaTestisENSMUST00000188390
Transcript ID Brain Ovary Placenta Testis
ENSMUST00000188390 24.455±0.00 72.246±0.00 136.747±93.74 165.088±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00020T CIL_00020T_0002 CGP 1:59586558-59719044
CIL_00020S CIL_00020S_0002 CGP 1:59684971-59879014

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000264279 NOP58-001 protein_coding Homo_sapiens 0 693
ENST00000433543 NOP58-008 nonsense_mediated_decay Homo_sapiens 0 285
ENST00000564443 RP11-430C1.2-001 processed_pseudogene Homo_sapiens 0 204

Loading