C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_00020S_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000055044-ENSG00000204217 CGP 9606 2:202265716-202567751
GeneTranscriptPositionBiotype
ENSG00000055044 (NOP58)
NOP58 ribonucleoprotein 		ENST00000264279 (NOP58-001) 202265716-202303666 protein_coding
ENST00000426814 (NOP58-006) 202265736-202284378 nonsense_mediated_decay
ENST00000433543 (NOP58-008) 202284438-202297906 nonsense_mediated_decay
ENST00000467734 (NOP58-007) 202265779-202284481 processed_transcript
ENST00000472050 (NOP58-003) 202265765-202284434 processed_transcript
ENST00000478508 (NOP58-010) 202299858-202303433 processed_transcript
ENST00000478941 (NOP58-004) 202278131-202290372 retained_intron
ENST00000488403 (NOP58-002) 202265736-202284712 retained_intron
ENST00000492688 (NOP58-005) 202275162-202291051 processed_transcript
ENST00000492740 (NOP58-009) 202265765-202275683 retained_intron
ENSG00000204217 (BMPR2)
bone morphogenetic protein receptor, type II (serine/threonine kinase) 		ENST00000374574 (BMPR2-002) 202377434-202567751 protein_coding
ENST00000374580 (BMPR2-001) 202376936-202567751 protein_coding
ENST00000479069 (BMPR2-003) 202464826-202475139 processed_transcript
ENSG00000212534 (SNORD70)
small nucleolar RNA, C/D box 70 		ENST00000391232 (SNORD70-201) 202276431-202276518 snoRNA
ENSG00000226261 (AC064836.3)
 ENST00000405197 (AC064836.3-001) 202336024-202336727 processed_pseudogene
ENSG00000236047 (AC073410.1)
 ENST00000435125 (AC073410.1-001) 202520401-202520989 processed_pseudogene
ENSG00000238317 (SNORD11)
small nucleolar RNA, C/D box 11 		ENST00000459124 (SNORD11-201) 202293051-202293134 snoRNA
ENSG00000242696 (RN7SL40P)
RNA, 7SL, cytoplasmic 40, pseudogene 		ENST00000474689 (RN7SL40P-201) 202357076-202357417 misc_RNA
ENSG00000264275 (RN7SL753P)
RNA, 7SL, cytoplasmic 753, pseudogene 		ENST00000581238 (RN7SL753P-201) 202333439-202333728 misc_RNA
ENSG00000270915 (RP11-27M5.1)
 ENST00000603240 (RP11-27M5.1-001) 202505012-202505343 processed_pseudogene
ENSG00000272966 (RP11-686O6.1)
 ENST00000609491 (RP11-686O6.1-001) 202336739-202337200 lincRNA
ENSG00000273456 (RP11-686O6.2)
 ENST00000607928 (RP11-686O6.2-001) 202374932-202375604 lincRNA
CIL_00020S_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000026020-ENSMUSG00000067336 CGP 10090 1:59684971-59879014
GeneTranscriptPositionBiotype
ENSMUSG00000026020 (Nop58)
NOP58 ribonucleoprotein 		ENSMUST00000027174 (Nop58-002) 59684977-59711510 protein_coding
ENSMUST00000185368 (Nop58-008) 59692444-59704209 retained_intron
ENSMUST00000185772 (Nop58-004) 59685021-59696052 protein_coding
ENSMUST00000186044 (Nop58-005) 59685006-59690989 retained_intron
ENSMUST00000187491 (Nop58-015) 59704159-59709099 nonsense_mediated_decay
ENSMUST00000187837 (Nop58-011) 59704198-59711279 protein_coding
ENSMUST00000188390 (Nop58-013) 59704709-59711280 protein_coding
ENSMUST00000189289 (Nop58-007) 59685003-59692688 retained_intron
ENSMUST00000189327 (Nop58-010) 59685054-59698422 nonsense_mediated_decay
ENSMUST00000189919 (Nop58-012) 59696027-59704161 nonsense_mediated_decay
ENSMUST00000190231 (Nop58-009) 59684985-59696077 protein_coding
ENSMUST00000190265 (Nop58-014) 59698416-59707064 nonsense_mediated_decay
ENSMUST00000190759 (Nop58-006) 59690179-59698386 retained_intron
ENSMUST00000191088 (Nop58-003) 59684971-59692666 processed_transcript
ENSMUST00000191142 (Nop58-001) 59685009-59719044 protein_coding
ENSMUSG00000067336 (Bmpr2)
bone morphogenetic protein receptor, type II (serine/threonine kinase) 		ENSMUST00000087435 (Bmpr2-001) 59763400-59879014 protein_coding
ENSMUST00000186246 (Bmpr2-002) 59851477-59856195 retained_intron
ENSMUST00000190659 (Bmpr2-003) 59850665-59852351 retained_intron

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_00020S_0001ENSG00000055044ENST00000264279ENST00000426814ENST00000433543ENST00000467734ENST00000472050ENST00000478508ENST00000478941ENST00000488403ENST00000492688ENST00000492740ENSG00000204217ENST00000374574ENST00000374580ENST00000479069ENSG00000212534ENST00000391232ENSG00000226261ENST00000405197ENSG00000236047ENST00000435125ENSG00000238317ENST00000459124ENSG00000242696ENST00000474689ENSG00000264275ENST00000581238ENSG00000270915ENST00000603240ENSG00000272966ENST00000609491ENSG00000273456ENST00000607928CIL_00020S_0002ENSMUSG00000026020ENSMUST00000027174ENSMUST00000185368ENSMUST00000185772ENSMUST00000186044ENSMUST00000187491ENSMUST00000187837ENSMUST00000188390ENSMUST00000189289ENSMUST00000189327ENSMUST00000189919ENSMUST00000190231ENSMUST00000190265ENSMUST00000190759ENSMUST00000191088ENSMUST00000191142ENSMUSG00000067336ENSMUST00000087435ENSMUST00000186246ENSMUST00000190659
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_00020S_0001ENSG00000055044ENST00000264279ENST00000433543ENST00000478508ENST00000488403ENST00000492688ENSG00000204217ENST00000374574ENST00000374580ENSG00000212534ENST00000391232ENSG00000226261ENST00000405197ENSG00000236047ENST00000435125ENSG00000238317ENST00000459124ENSG00000242696ENST00000474689ENSG00000264275ENST00000581238ENSG00000270915ENST00000603240ENSG00000272966ENST00000609491ENSG00000273456ENST00000607928CIL_00020S_0002ENSMUSG00000026020ENSMUST00000027174ENSMUST00000187491ENSMUST00000187837ENSMUST00000188390ENSMUST00000189289ENSMUST00000189919ENSMUST00000190231ENSMUST00000190265ENSMUST00000191088ENSMUST00000191142ENSMUSG00000067336ENSMUST00000087435
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000055044 ENST00000264279 8.604±0.00 19.913±0.00 0.606±0.00 6.037±4.22 4.320±2.03 7.708±5.45 4.082±3.03 14.118±0.00 6.595±4.05 8.388±0.00 3.056±0.00 28.049±23.39 10.639±6.41 19.092±0.99
ENST00000426814 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000433543 N/A N/A 1.812±0.00 N/A N/A N/A 1.667±0.00 N/A N/A N/A N/A 63.802±0.00 N/A 18.889±0.00
ENST00000467734 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000472050 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000478508 N/A N/A N/A N/A N/A N/A N/A N/A N/A 3.940±0.00 N/A N/A N/A N/A
ENST00000478941 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000488403 N/A N/A 2.910±0.00 N/A N/A N/A N/A N/A 3.956±0.00 N/A N/A N/A N/A N/A
ENST00000492688 N/A N/A N/A N/A N/A N/A N/A 6.967±0.00 N/A N/A 2.105±0.00 20.572±0.00 N/A N/A
ENST00000492740 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000204217 ENST00000374574 N/A 1.049±0.00 N/A N/A 0.898±0.00 N/A N/A N/A 0.204±0.00 N/A N/A N/A N/A N/A
ENST00000374580 10.523±0.00 5.571±0.00 5.107±0.00 11.048±0.96 7.616±0.90 5.494±3.01 6.538±2.36 5.478±1.54 4.881±3.47 19.452±2.17 3.106±1.18 5.494±0.82 6.680±1.42 4.186±3.56
ENST00000479069 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000212534 ENST00000391232 N/A N/A N/A N/A N/A N/A N/A 0.909±0.00 N/A N/A N/A N/A N/A N/A
ENSG00000226261 ENST00000405197 N/A 0.217±0.00 0.090±0.00 N/A 0.328±0.00 N/A N/A N/A 0.033±0.00 0.130±0.00 N/A 0.156±0.00 N/A 0.235±0.00
ENSG00000236047 ENST00000435125 0.184±0.00 N/A 1.733±0.00 0.256±0.14 1.419±1.13 1.941±0.00 0.225±0.04 0.113±0.00 2.962±0.00 2.505±1.31 0.815±0.67 0.792±0.60 0.630±0.57 1.334±1.18
ENSG00000238317 ENST00000459124 N/A N/A N/A 0.790±0.00 1.002±0.00 N/A N/A N/A N/A 1.753±0.00 N/A N/A N/A N/A
ENSG00000242696 ENST00000474689 0.293±0.00 0.545±0.00 N/A 0.822±0.00 N/A 0.058±0.00 0.176±0.00 0.317±0.00 0.057±0.00 0.311±0.00 N/A 0.287±0.03 N/A 0.493±0.07
ENSG00000264275 ENST00000581238 N/A 0.271±0.00 N/A 0.057±0.00 0.273±0.00 N/A N/A N/A N/A N/A N/A 0.502±0.00 N/A 0.123±0.00
ENSG00000270915 ENST00000603240 N/A 0.264±0.00 N/A 0.039±0.00 0.109±0.00 0.136±0.00 N/A N/A N/A 0.920±0.00 N/A N/A N/A 0.242±0.00
ENSG00000272966 ENST00000609491 N/A 0.199±0.00 N/A 0.061±0.00 0.128±0.00 0.812±0.00 N/A 1.864±0.00 0.065±0.00 N/A N/A 0.089±0.00 N/A 0.085±0.00
ENSG00000273456 ENST00000607928 1.503±0.00 4.374±0.00 0.414±0.00 2.153±1.47 1.207±0.73 0.773±0.33 0.346±0.00 0.801±0.00 0.545±0.39 1.288±0.00 1.405±0.00 1.521±0.85 1.186±0.72 3.253±0.78
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000026020 ENSMUST00000027174 8.094±4.49 3.052±0.67 6.157±0.11 9.607±5.08 5.448±0.87 5.202±1.33 3.726±0.38 4.217±1.06 10.800±8.59 4.625±0.84 3.564±0.38 8.639±5.72 21.036±14.26 14.155±1.10
ENSMUST00000185368 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000185772 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000186044 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000187491 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 217.080±0.00 328.367±238.19 551.197±0.00
ENSMUST00000187837 N/A N/A N/A 29.622±0.00 N/A N/A N/A N/A N/A N/A 3.005±0.29 54.909±39.04 106.552±106.96 154.361±0.00
ENSMUST00000188390 N/A N/A N/A 24.455±0.00 N/A N/A N/A N/A N/A N/A N/A 72.246±0.00 136.747±93.74 165.088±0.00
ENSMUST00000189289 N/A 26.177±3.87 N/A N/A 15.488±8.65 20.039±6.58 N/A 4.259±1.54 4.058±0.00 6.690±1.35 N/A 22.096±5.95 N/A N/A
ENSMUST00000189327 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000189919 N/A N/A N/A 18.552±0.00 N/A N/A N/A N/A N/A N/A N/A 53.520±0.00 27.056±0.00 N/A
ENSMUST00000190231 N/A 6.188±2.61 N/A N/A 10.566±4.18 N/A N/A N/A N/A N/A N/A 29.713±6.73 N/A N/A
ENSMUST00000190265 N/A N/A N/A 15.483±0.00 N/A N/A N/A N/A N/A N/A N/A 40.760±0.00 62.161±32.76 N/A
ENSMUST00000190759 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000191088 8.625±0.00 10.138±1.01 N/A N/A 12.886±0.00 11.320±3.38 1.930±0.00 3.877±0.83 5.741±3.43 8.131±2.62 N/A 16.360±8.23 N/A 11.436±2.17
ENSMUST00000191142 0.530±0.34 0.379±0.09 0.817±0.00 1.938±0.68 0.316±0.05 N/A 0.146±0.03 0.188±0.05 0.990±0.93 0.338±0.06 0.424±0.07 1.046±0.44 1.331±0.12 0.399±0.07
ENSMUSG00000067336 ENSMUST00000087435 7.600±1.84 8.929±1.64 2.572±0.81 5.622±2.18 5.610±0.87 3.701±0.47 5.924±0.71 5.487±0.39 1.589±0.90 49.990±1.09 2.837±1.71 18.485±3.52 6.381±2.88 0.968±0.32
ENSMUST00000186246 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000190659 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A

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