C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: BCL2-associated transcription factor 1
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000188546 Bclaf1-004 ENSMUSG00000037608 10090 + 10:20333254-20340206 retained_intron

Mus musculus EnsemblGRCm38

Genome
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Genes
Structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; BrainOvaryPlacentaTestisENSMUST00000188546
Transcript ID Brain Ovary Placenta Testis
ENSMUST00000188546 57.089±0.00 116.381±0.00 65.846±22.87 92.780±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_000879 CIL_000879_0002 VISTA 10:20184902-20788767

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000353331 BCLAF1-201 protein_coding Homo_sapiens 0 503
ENST00000392348 BCLAF1-011 protein_coding Homo_sapiens 0 355
ENST00000505813 CTD-2089O24.1-001 processed_pseudogene Homo_sapiens 0 675
ENST00000526228 BCLAF1-015 retained_intron Homo_sapiens 0 767
ENST00000527536 BCLAF1-005 protein_coding Homo_sapiens 0 503
ENST00000527613 BCLAF1-008 nonsense_mediated_decay Homo_sapiens 0 970
ENST00000527759 BCLAF1-006 protein_coding Homo_sapiens 0 972
ENST00000529522 BCLAF1-014 retained_intron Homo_sapiens 0 503
ENST00000529917 BCLAF1-012 processed_transcript Homo_sapiens 0 893
ENST00000530429 BCLAF1-009 nonsense_mediated_decay Homo_sapiens 0 503
ENST00000530767 BCLAF1-010 protein_coding Homo_sapiens 0 972
ENST00000531224 BCLAF1-003 protein_coding Homo_sapiens 0 972
ENST00000532384 BCLAF1-002 nonsense_mediated_decay Homo_sapiens 0 503
ENST00000533422 BCLAF1-021 nonsense_mediated_decay Homo_sapiens 0 388
ENST00000534269 BCLAF1-007 nonsense_mediated_decay Homo_sapiens 0 970
ENST00000534762 BCLAF1-020 protein_coding Homo_sapiens 0 935
ENST00000624956 ABBA01017803.1-201 pseudogene Homo_sapiens 0 340

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