C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: histone cluster 1, H3h
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000188775 Hist1h3h-001 ENSMUSG00000101355 10090 + 13:21717659-21718069 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeBladderBrainBreastColonKidneyLiverLungOvaryPlacentaTestisENSMUST00000188775
Transcript ID Adipose Bladder Brain Breast Colon Kidney Liver Lung Ovary Placenta Testis
ENSMUST00000188775 0.436±0.24 0.437±0.00 6.442±4.38 0.194±0.10 0.360±0.18 0.145±0.00 13.179±16.56 0.183±0.00 0.539±0.19 0.809±0.30 0.266±0.16

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00096D CIL_00096D_0002 VISTA 13:21673105-22276611

Gene Ontology

GO IDEvidence TypeGO Description
GO:0000786 IEA nucleosome
GO:0003677 IEA DNA binding
GO:0005515 IPI protein binding
GO:0005654 TAS nucleoplasm
GO:0046982 IEA protein heterodimerization activity

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSDART00000115062 si:ch211-113a14.14-201 protein_coding Danio_rerio 0 472
ENSDART00000123081 si:ch211-113a14.14-204 protein_coding Danio_rerio 0 460
ENSDART00000152546 si:ch211-113a14.14-001 protein_coding Danio_rerio 0 460
ENSDART00000129254 si:ch211-113a14.14-203 protein_coding Danio_rerio 0 455
ENSDART00000133379 hist2h3c-001 protein_coding Danio_rerio 0 449
ENSDART00000126541 si:ch211-113a14.14-202 protein_coding Danio_rerio 0 449
ENSDART00000108895 si:dkey-261m9.16-001 protein_coding Danio_rerio 0 449
ENSDART00000157370 hist2h3c-001 protein_coding Danio_rerio 0 444
ENSDART00000156376 hist2h3c-001 protein_coding Danio_rerio 0 444
ENSDART00000103016 si:ch211-113a14.14-001 protein_coding Danio_rerio 0 438
ENSDART00000154856 hist2h3c-001 protein_coding Danio_rerio 0 438
ENSDART00000103007 zgc:173552-001 protein_coding Danio_rerio 0 438
ENSDART00000136456 protein_coding Danio_rerio 0 433
ENSDART00000073405 si:ch211-113a14.14-001 protein_coding Danio_rerio 0 431
ENSDART00000089844 protein_coding Danio_rerio 0 422
ENSDART00000151600 protein_coding Danio_rerio 0 364
ENSDART00000093030 protein_coding Danio_rerio 0 355
ENST00000356476 HIST1H3D-001 protein_coding Homo_sapiens 0 505
ENST00000366696 HIST3H3-001 protein_coding Homo_sapiens 0 497
ENST00000369158 HIST2H3C-001 protein_coding Homo_sapiens 0 560
ENST00000369163 HIST1H3H-001 protein_coding Homo_sapiens 0 496
ENST00000403683 HIST2H3A-001 protein_coding Homo_sapiens 0 560
ENST00000614911 HIST1H3E-001 protein_coding Homo_sapiens 0 470
ENST00000618052 HIST1H3F-001 protein_coding Homo_sapiens 0 455

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