C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: fibronectin 1
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000188894 Fn1-003 ENSMUSG00000026193 10090 - 1:71585520-71653172 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainColonHeartKidneyLungOvaryPlacentaTestisENSMUST00000188894
Transcript ID Adipose Adrenal Bladder Brain Colon Heart Kidney Lung Ovary Placenta Testis
ENSMUST00000188894 59.108±46.91 1.855±0.47 47.266±7.63 4.109±0.00 18.969±2.45 2.326±0.53 5.694±1.27 16.969±3.41 32.029±9.58 186.321±137.11 2.478±1.07

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0005MI CIL_0005MI_0002 CGP 1:71557150-71653200
CIL_0005MJ CIL_0005MJ_0002 CGP 1:71585520-72212307

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSDART00000023692 fn1b-201 protein_coding Danio_rerio 0 235
ENSDART00000103754 fn1b-003 retained_intron Danio_rerio 0 235
ENSDART00000103755 fn1b-001 protein_coding Danio_rerio 0 235
ENST00000323926 FN1-002 protein_coding Homo_sapiens 0 4246
ENST00000336916 FN1-003 protein_coding Homo_sapiens 0 7105
ENST00000354785 FN1-001 protein_coding Homo_sapiens 0 4268
ENST00000356005 FN1-013 protein_coding Homo_sapiens 0 5343
ENST00000357867 FN1-004 protein_coding Homo_sapiens 0 5343
ENST00000359671 FN1-201 protein_coding Homo_sapiens 0 8512
ENST00000421182 FN1-005 protein_coding Homo_sapiens 0 5343
ENST00000426059 FN1-014 protein_coding Homo_sapiens 0 2296
ENST00000432072 FN1-012 protein_coding Homo_sapiens 0 4246
ENST00000438981 FN1-026 protein_coding Homo_sapiens 0 455
ENST00000443816 FN1-009 protein_coding Homo_sapiens 0 5343
ENST00000446046 FN1-008 protein_coding Homo_sapiens 0 6745
ENST00000456923 FN1-011 protein_coding Homo_sapiens 0 2484
ENST00000460217 FN1-025 retained_intron Homo_sapiens 0 460
ENST00000461974 FN1-022 retained_intron Homo_sapiens 0 364
ENST00000474036 FN1-027 retained_intron Homo_sapiens 0 1051
ENST00000485567 FN1-023 retained_intron Homo_sapiens 0 638
ENST00000490833 FN1-028 processed_transcript Homo_sapiens 0 553
ENST00000492816 FN1-007 retained_intron Homo_sapiens 0 1328
ENST00000494446 FN1-017 retained_intron Homo_sapiens 0 603
ENST00000498719 FN1-010 retained_intron Homo_sapiens 0 573

Loading