C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info

Description: nucleolin
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000189504 Ncl-004 ENSMUSG00000026234 10090 - 1:86351101-86352306 retained_intron

Expression Patterns

No expression data.

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_000899 CIL_000899_0002 VISTA 1:86187174-86788752
CIL_0007WD CIL_0007WD_0002 VISTA 1:86187834-86792789
CIL_0004KZ CIL_0004KZ_0003 CGP 1:86302832-86359400
CIL_00076N CIL_00076N_0002 CGP 1:86344719-86388162

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000322723 NCL-001 protein_coding Homo_sapiens 0 268
ENST00000356936 NCL-015 protein_coding Homo_sapiens 0 268
ENST00000416078 NCLP2-001 processed_pseudogene Homo_sapiens 2e-22 111
ENST00000461347 NCL-002 retained_intron Homo_sapiens 0 268
ENST00000466274 NCL-016 retained_intron Homo_sapiens 0 265

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