C-It-Loci: A knowledge database for tissue-enriched loci.
Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main
Transcript Info |
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| Description: | nucleolin | |||||
|---|---|---|---|---|---|---|
| Transcript Accession | Transcript Name | Contained in Gene | Tax ID | Strand | Position | Biotype |
ENST00000356936  |
NCL-015 |
ENSG00000115053 |
9606 | - |
2:231455442-231458357  |
protein_coding |
Expression PatternsNo expression data. |
Conserved Regions | |||
|---|---|---|---|
| Region ID | Sub-Region | Region Type | Position |
| CIL_000899 | CIL_000899_0001 | VISTA | 2:231361987-231963495 |
| CIL_0007WD | CIL_0007WD_0001 | VISTA | 2:231362545-231967398 |
| CIL_0004KZ | CIL_0004KZ_0002 | CGP | 2:231395543-231483641 |
| CIL_00076N | CIL_00076N_0001 | CGP | 2:231453531-231530495 |
Gene Ontology | ||
|---|---|---|
| GO ID | Evidence Type | GO Description |
| GO:0000166 | IEA | nucleotide binding |
| GO:0003676 | IEA | nucleic acid binding |
| GO:0005634 | IDA | nucleus |
| GO:0005730 | IDA | nucleolus |
Homologs | |||||
| ENSEMBL Accession | Gene Name | Biotype | Species | E-Value | Bit Score |
|
ENSMUST00000027438
|
Ncl-001 | protein_coding | Mus_musculus | 0 | 702 |
|
ENSMUST00000185676
|
Ncl-002 | retained_intron | Mus_musculus | 0 | 529 |
|
ENSMUST00000186050
|
Ncl-005 | retained_intron | Mus_musculus | 0 | 403 |
|
ENSMUST00000186435
|
RP24-108N24.2-001 | processed_pseudogene | Mus_musculus | 0 | 268 |
|
ENSMUST00000189504
|
Ncl-004 | retained_intron | Mus_musculus | 0 | 268 |
|
ENSMUST00000188682
|
Ncl-006 | retained_intron | Mus_musculus | 0 | 241 |
|
ENSMUST00000119030
|
Gm12020-001 | processed_pseudogene | Mus_musculus | 0 | 220 |
