C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: ganglioside-induced differentiation-associated-protein 1
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000189736 Gdap1-003 ENSMUSG00000025777 10090 + 1:17145468-17161631 nonsense_mediated_decay

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBrainKidneyOvaryPlacentaTestisENSMUST00000189736
Transcript ID Adipose Adrenal Brain Kidney Ovary Placenta Testis
ENSMUST00000189736 0.040±0.00 0.208±0.04 56.847±0.00 0.043±0.02 0.395±0.34 0.130±0.00 2.503±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00008Q CIL_00008Q_0003 CGP 1:16964560-17164271
CIL_00008K CIL_00008K_0003 CGP 1:17145362-17630939

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000220822 GDAP1-001 protein_coding Homo_sapiens 0 1116
ENST00000434412 GDAP1-002 protein_coding Homo_sapiens 0 1116
ENST00000520797 GDAP1-008 processed_transcript Homo_sapiens 0 920
ENST00000521096 GDAP1-007 processed_transcript Homo_sapiens 0 965
ENST00000522568 GDAP1-003 nonsense_mediated_decay Homo_sapiens 0 1266
ENST00000524195 GDAP1-005 processed_transcript Homo_sapiens 2e-35 152
ENST00000524366 GDAP1-004 processed_transcript Homo_sapiens 0 333

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