C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info

Description: phosphoinositide kinase, FYVE finger containing
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000190058 Pikfyve-007 ENSMUSG00000025949 10090 + 1:65186689-65246898 nonsense_mediated_decay

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdrenalBreastColonOvaryENSMUST00000190058
Transcript ID Adrenal Breast Colon Ovary
ENSMUST00000190058 0.949±0.09 1.863±0.60 0.876±0.10 1.962±0.58

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00014C CIL_00014C_0002 CGP 1:65158616-65278695
CIL_0006P3 CIL_0006P3_0002 CGP 1:65186683-65389244

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000264380 PIKFYVE-001 protein_coding Homo_sapiens 0 3548
ENST00000308862 PIKFYVE-005 protein_coding Homo_sapiens 0 1519
ENST00000392202 PIKFYVE-002 protein_coding Homo_sapiens 0 1517
ENST00000407449 PIKFYVE-004 protein_coding Homo_sapiens 0 1519
ENST00000422495 PIKFYVE-009 protein_coding Homo_sapiens 0 424
ENST00000443896 PIKFYVE-003 nonsense_mediated_decay Homo_sapiens 0 4126
ENST00000452564 PIKFYVE-006 protein_coding Homo_sapiens 0 2030
ENST00000477200 PIKFYVE-007 retained_intron Homo_sapiens 0 569

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