C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info

Description: phosphoinositide kinase, FYVE finger containing
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000443896 PIKFYVE-003 ENSG00000115020 9606 + 2:208266267-208326107 nonsense_mediated_decay

Expression Patterns

Heat Map
Numeric Values
Transcript'; BladderENST00000443896
Transcript ID Bladder
ENST00000443896 1.526±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00014C CIL_00014C_0001 CGP 2:208236227-208358751
CIL_0006P3 CIL_0006P3_0001 CGP 2:208266267-208854503

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000190058 Pikfyve-007 nonsense_mediated_decay Mus_musculus 0 4126
ENSMUST00000097707 Pikfyve-006 protein_coding Mus_musculus 0 3544
ENSMUST00000081154 Pikfyve-001 protein_coding Mus_musculus 0 2026
ENSMUST00000186404 Pikfyve-005 retained_intron Mus_musculus 0 1607
ENSMUST00000188799 Pikfyve-010 retained_intron Mus_musculus 0 1219
ENSMUST00000190847 Pikfyve-009 retained_intron Mus_musculus 0 627
ENSMUST00000189925 Pikfyve-004 processed_transcript Mus_musculus 0 549
ENSMUST00000185317 Pikfyve-002 retained_intron Mus_musculus 0 549
ENSMUST00000185263 Pikfyve-008 nonsense_mediated_decay Mus_musculus 0 281
ENSMUST00000187579 Pikfyve-003 retained_intron Mus_musculus 0 237

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