C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info

Description: phosphoinositide kinase, FYVE finger containing
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000452564 PIKFYVE-006 ENSG00000115020 9606 + 2:208266363-208335856 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; HeartLiverENST00000452564
Transcript ID Heart Liver
ENST00000452564 0.764±0.00 2.662±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00014C CIL_00014C_0001 CGP 2:208236227-208358751
CIL_0006P3 CIL_0006P3_0001 CGP 2:208266267-208854503

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005524 IEA ATP binding
GO:0035556 IEA intracellular signal transduction
GO:0044267 IEA cellular protein metabolic process
GO:0046872 IEA metal ion binding

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000081154 Pikfyve-001 protein_coding Mus_musculus 0 4977
ENSMUST00000097707 Pikfyve-006 protein_coding Mus_musculus 0 3339
ENSMUST00000186404 Pikfyve-005 retained_intron Mus_musculus 0 2058
ENSMUST00000188799 Pikfyve-010 retained_intron Mus_musculus 0 2056
ENSMUST00000190058 Pikfyve-007 nonsense_mediated_decay Mus_musculus 0 2030
ENSMUST00000189925 Pikfyve-004 processed_transcript Mus_musculus 0 1214
ENSMUST00000185317 Pikfyve-002 retained_intron Mus_musculus 0 1214
ENSMUST00000190847 Pikfyve-009 retained_intron Mus_musculus 0 665
ENSMUST00000185263 Pikfyve-008 nonsense_mediated_decay Mus_musculus 0 279
ENSMUST00000187579 Pikfyve-003 retained_intron Mus_musculus 0 237

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