C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: ADP-ribosylation factor 5
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000000233 ARF5-001 ENSG00000004059 9606 + 7:127588345-127591705 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000000233
Transcript ID Adipose Adrenal Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000000233 53.810±0.00 53.790±0.00 40.612±26.49 54.824±0.00 24.647±20.53 18.145±16.51 40.748±37.22 52.978±0.00 87.976±0.00 25.713±20.13 71.196±38.82 105.737±28.35 55.879±6.95

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0008LN CIL_0008LN_0001 VISTA 7:127234332-127837492
CIL_0001OK CIL_0001OK_0001 CGP 7:127346790-127593611
CIL_0001OJ CIL_0001OJ_0001 CGP 7:127580618-127593611
CIL_0001OI CIL_0001OI_0001 CGP 7:127588345-127602144

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003924 TAS:IEA GTPase activity
GO:0004871 IEA signal transducer activity
GO:0005515 IPI protein binding
GO:0005525 IEA GTP binding
GO:0005622 IEA intracellular
GO:0005634 IEA nucleus
GO:0005737 IEA cytoplasm
GO:0005794 IEA Golgi apparatus
GO:0005886 IEA plasma membrane
GO:0006184 TAS GTP catabolic process
GO:0006886 IEA intracellular protein transport
GO:0007186 IEA G-protein coupled receptor signaling pathway
GO:0007264 IEA small GTPase mediated signal transduction
GO:0015031 IEA protein transport
GO:0016192 IEA vesicle-mediated transport
GO:0019001 IEA guanyl nucleotide binding
GO:0031683 IEA G-protein beta/gamma-subunit complex binding
GO:0070062 IDA extracellular vesicular exosome

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000020717 Arf5-001 protein_coding Mus_musculus 0 1362
ENSMUST00000169841 Arf5-201 protein_coding Mus_musculus 0 1123

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