C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: vesicle transport through interaction with t-SNAREs 1B
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000216456 VTI1B-002 ENSG00000100568 9606 - 14:67651264-67674610 nonsense_mediated_decay

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBrainBreastColonHeartOvaryPlacentaTestisENST00000216456
Transcript ID Adipose Adrenal Brain Breast Colon Heart Ovary Placenta Testis
ENST00000216456 37.049±0.00 26.490±0.00 52.872±0.00 54.469±0.00 37.264±0.00 14.073±11.26 26.111±3.67 23.240±7.72 34.939±5.22

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0002CL CIL_0002CL_0001 CGP 14:67581955-67651720
CIL_0001KL CIL_0001KL_0002 CGP 14:67619798-67674831

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000055262 Vti1b-001 protein_coding Mus_musculus 0 730
ENSMUST00000162789 Vti1b-002 nonsense_mediated_decay Mus_musculus 0 652
ENSMUST00000162569 Vti1b-004 protein_coding Mus_musculus 0 438
ENSMUST00000163031 Vti1b-003 nonsense_mediated_decay Mus_musculus 0 255

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