C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: H2A histone family, member V
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000222690 H2AFV-001 ENSG00000105968 9606 - 7:44826791-44848077 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000222690
Transcript ID Adipose Adrenal Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000222690 5.940±0.00 10.158±0.00 23.351±0.00 10.847±0.00 10.106±0.00 9.490±0.00 11.622±0.00 9.806±0.00 10.043±0.00 9.559±3.40 10.852±2.88 5.726±0.59 8.721±0.64

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0000SB CIL_0000SB_0001 CGP 7:44796680-44848083
CIL_0007BS CIL_0007BS_0002 CGP 7:44826791-44885361

Gene Ontology

GO IDEvidence TypeGO Description
GO:0000786 IEA nucleosome
GO:0003674 ND molecular_function
GO:0003677 IEA DNA binding
GO:0005634 IDA:IEA nucleus
GO:0008150 ND biological_process
GO:0046982 IEA protein heterodimerization activity
GO:0070062 IDA extracellular vesicular exosome

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000109737 H2afv-001 protein_coding Mus_musculus 0 460
ENSMUST00000093346 H2afv-002 protein_coding Mus_musculus 2e-39 169

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