C-It-Loci: A knowledge database for tissue-enriched loci.
Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main
Transcript Info |
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| Description: | putative homeodomain transcription factor 2 | |||||
|---|---|---|---|---|---|---|
| Transcript Accession | Transcript Name | Contained in Gene | Tax ID | Strand | Position | Biotype |
ENST00000248550  |
PHTF2-006 |
ENSG00000006576 |
9606 | + |
7:77840180-77957222  |
protein_coding |
Expression PatternsNo expression data. |
Conserved Regions | |||
|---|---|---|---|
| Region ID | Sub-Region | Region Type | Position |
| CIL_000862 | CIL_000862_0001 | VISTA | 7:77397445-77998455 |
Gene Ontology | ||
|---|---|---|
| GO ID | Evidence Type | GO Description |
| GO:0003677 | IEA | DNA binding |
| GO:0005634 | IEA | nucleus |
| GO:0005783 | IDA | endoplasmic reticulum |
| GO:0006351 | IEA | transcription, DNA-templated |
| GO:0006355 | IEA | regulation of transcription, DNA-templated |
Homologs | |||||
| ENSEMBL Accession | Gene Name | Biotype | Species | E-Value | Bit Score |
|
ENSMUST00000118174
|
Phtf2-001 | protein_coding | Mus_musculus | 0 | 2745 |
|
ENSMUST00000139325
|
Phtf2-003 | retained_intron | Mus_musculus | 0 | 1096 |
|
ENSMUST00000140147
|
Phtf2-002 | retained_intron | Mus_musculus | 0 | 918 |
|
ENSMUST00000153194
|
Phtf2-004 | nonsense_mediated_decay | Mus_musculus | 0 | 704 |
|
ENSMUST00000124431
|
Phtf2-007 | nonsense_mediated_decay | Mus_musculus | 0 | 556 |
|
ENSMUST00000133784
|
Phtf2-005 | processed_transcript | Mus_musculus | 0 | 531 |
|
ENSMUST00000156044
|
Phtf2-006 | nonsense_mediated_decay | Mus_musculus | 0 | 296 |
