C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: putative homeodomain transcription factor 2
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000140147 Phtf2-002 ENSMUSG00000039987 10090 - 5:20793302-20882078 retained_intron

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdrenalColonKidneyLiverLungOvaryTestisENSMUST00000140147
Transcript ID Adrenal Colon Kidney Liver Lung Ovary Testis
ENSMUST00000140147 0.234±0.08 0.233±0.00 0.739±0.17 0.439±0.22 0.433±0.00 0.370±0.01 0.456±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0008S6 CIL_0008S6_0002 VISTA 5:20193774-20794889
CIL_000862 CIL_000862_0002 VISTA 5:20650023-21250986

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000248550 PHTF2-006 protein_coding Homo_sapiens 0 918
ENST00000275575 PHTF2-002 protein_coding Homo_sapiens 0 1127
ENST00000307305 PHTF2-003 protein_coding Homo_sapiens 0 1146
ENST00000415251 PHTF2-004 protein_coding Homo_sapiens 0 1131
ENST00000416283 PHTF2-201 protein_coding Homo_sapiens 0 918
ENST00000422959 PHTF2-001 protein_coding Homo_sapiens 0 1090
ENST00000424760 PHTF2-010 protein_coding Homo_sapiens 0 1146
ENST00000450574 PHTF2-005 protein_coding Homo_sapiens 0 1033
ENST00000454592 PHTF2-007 processed_transcript Homo_sapiens 0 588
ENST00000479515 PHTF2-008 retained_intron Homo_sapiens 0 383

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