C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: putative homeodomain transcription factor 2
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000124431 Phtf2-007 ENSMUSG00000039987 10090 - 5:20782388-20805707 nonsense_mediated_decay

Expression Patterns

Heat Map
Numeric Values
Transcript'; BrainColonOvaryPlacentaTestisENSMUST00000124431
Transcript ID Brain Colon Ovary Placenta Testis
ENSMUST00000124431 6.486±0.00 1.065±0.00 10.202±0.00 10.795±3.74 5.416±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0008S6 CIL_0008S6_0002 VISTA 5:20193774-20794889
CIL_000862 CIL_000862_0002 VISTA 5:20650023-21250986

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000248550 PHTF2-006 protein_coding Homo_sapiens 0 556
ENST00000275575 PHTF2-002 protein_coding Homo_sapiens 0 556
ENST00000307305 PHTF2-003 protein_coding Homo_sapiens 0 556
ENST00000415251 PHTF2-004 protein_coding Homo_sapiens 0 556
ENST00000416283 PHTF2-201 protein_coding Homo_sapiens 0 556
ENST00000422959 PHTF2-001 protein_coding Homo_sapiens 0 556
ENST00000424760 PHTF2-010 protein_coding Homo_sapiens 0 556
ENST00000450574 PHTF2-005 protein_coding Homo_sapiens 0 556
ENST00000454592 PHTF2-007 processed_transcript Homo_sapiens 0 556
ENST00000479515 PHTF2-008 retained_intron Homo_sapiens 0 556

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