C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: putative homeodomain transcription factor 2
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000153194 Phtf2-004 ENSMUSG00000039987 10090 - 5:20759663-20774113 nonsense_mediated_decay

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdrenalBreastColonKidneyLiverLungOvaryTestisENSMUST00000153194
Transcript ID Adrenal Breast Colon Kidney Liver Lung Ovary Testis
ENSMUST00000153194 0.565±0.12 1.339±0.06 0.471±0.21 0.472±0.00 0.457±0.00 0.652±0.08 0.876±0.20 0.497±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0008S6 CIL_0008S6_0002 VISTA 5:20193774-20794889
CIL_000862 CIL_000862_0002 VISTA 5:20650023-21250986

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003674 ND molecular_function
GO:0008150 ND biological_process

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSDART00000123940 phtf2-202 protein_coding Danio_rerio 0 198
ENST00000248550 PHTF2-006 protein_coding Homo_sapiens 0 704
ENST00000275575 PHTF2-002 protein_coding Homo_sapiens 0 704
ENST00000307305 PHTF2-003 protein_coding Homo_sapiens 0 704
ENST00000416283 PHTF2-201 protein_coding Homo_sapiens 0 704
ENST00000422959 PHTF2-001 protein_coding Homo_sapiens 0 630
ENST00000470215 PHTF2-009 processed_transcript Homo_sapiens 0 333

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