C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: peptidase (mitochondrial processing) beta
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000249269 PMPCB-001 ENSG00000105819 9606 + 7:103297422-103313235 protein_coding

Homo sapiens EnsemblGRCh38

Genome
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Genes
Structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; BrainBreastColonHeartKidneyMuscleOvaryENST00000249269
Transcript ID Brain Breast Colon Heart Kidney Muscle Ovary
ENST00000249269 5.622±0.00 2.391±0.00 3.224±0.00 2.199±0.00 4.163±0.00 1.124±0.00 3.830±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0005CJ CIL_0005CJ_0001 CGP 7:103099776-103329511
CIL_0001RL CIL_0001RL_0002 CGP 7:103297422-103344873

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003824 IEA catalytic activity
GO:0004222 IEA metalloendopeptidase activity
GO:0005739 IEA mitochondrion
GO:0005743 IEA mitochondrial inner membrane
GO:0006508 IEA proteolysis
GO:0006626 TAS protein targeting to mitochondrion
GO:0044267 TAS cellular protein metabolic process
GO:0046872 IEA metal ion binding

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000030882 Pmpcb-001 protein_coding Mus_musculus 0 1587
ENSMUST00000125693 Pmpcb-002 retained_intron Mus_musculus 0 839
ENSMUST00000150861 Pmpcb-006 retained_intron Mus_musculus 0 396

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