| Transcript ID | Brain | Liver | Testis |
|---|---|---|---|
| ENST00000255622 | 1.592±0.00 | 0.026±0.00 | 0.306±0.00 |
C-It-Loci: A knowledge database for tissue-enriched loci.
Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main
Transcript Info |
||||||
| Description: | phosphodiesterase 6B, cGMP-specific, rod, beta | |||||
|---|---|---|---|---|---|---|
| Transcript Accession | Transcript Name | Contained in Gene | Tax ID | Strand | Position | Biotype |
ENST00000255622  |
PDE6B-001 |
ENSG00000133256 |
9606 | + |
4:625584-670782  |
protein_coding |
Expression Patterns
|
Conserved Regions | |||
|---|---|---|---|
| Region ID | Sub-Region | Region Type | Position |
| CIL_00070Z | CIL_00070Z_0002 | CGP | 4:625584-674338 |
Gene Ontology | ||
|---|---|---|
| GO ID | Evidence Type | GO Description |
| GO:0004114 | IEA | 3',5'-cyclic-nucleotide phosphodiesterase activity |
| GO:0005515 | IEA | protein binding |
| GO:0005886 | TAS | plasma membrane |
| GO:0007165 | IEA | signal transduction |
| GO:0007601 | IEA | visual perception |
| GO:0007603 | TAS | phototransduction, visible light |
| GO:0008152 | IEA | metabolic process |
| GO:0016056 | TAS | rhodopsin mediated signaling pathway |
| GO:0022400 | TAS | regulation of rhodopsin mediated signaling pathway |
| GO:0046037 | IMP | GMP metabolic process |
| GO:0046872 | IEA | metal ion binding |
| GO:0047555 | IMP | 3',5'-cyclic-GMP phosphodiesterase activity |
| GO:0051480 | IMP | cytosolic calcium ion homeostasis |
| GO:0097381 | TAS | photoreceptor disc membrane |
Homologs | |||||
| ENSEMBL Accession | Gene Name | Biotype | Species | E-Value | Bit Score |
|
ENSMUST00000031456
|
Pde6b-001 | protein_coding | Mus_musculus | 0 | 2667 |
|
ENSMUST00000134865
|
Pde6b-002 | retained_intron | Mus_musculus | 0 | 1437 |
|
ENSMUST00000025956
|
Pde6c-201 | protein_coding | Mus_musculus | 0 | 324 |
|
ENSMUST00000112329
|
Pde6c-202 | protein_coding | Mus_musculus | 0 | 215 |
