C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: RAD50 interactor 1
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000257700 RINT1-001 ENSG00000135249 9606 + 7:105532085-105567677 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeBrainBreastColonHeartKidneyMuscleOvaryPlacentaTestisENST00000257700
Transcript ID Adipose Brain Breast Colon Heart Kidney Muscle Ovary Placenta Testis
ENST00000257700 1.165±0.00 1.158±0.00 1.199±0.50 1.222±0.00 0.781±0.40 0.912±0.00 2.108±0.00 2.639±1.62 1.651±0.46 3.515±1.15

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00040X CIL_00040X_0001 CGP 7:105439661-105567677

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005515 IPI protein binding
GO:0005783 IDA endoplasmic reticulum
GO:0007049 IEA cell cycle
GO:0015031 IEA protein transport
GO:0016020 IEA membrane
GO:0016192 IEA vesicle-mediated transport
GO:1902504 IMP regulation of signal transduction involved in mitotic G2 DNA damage checkpoint

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000030852 Rint1-001 protein_coding Mus_musculus 0 2418
ENSMUST00000115113 Rint1-002 protein_coding Mus_musculus 0 1812
ENSMUST00000124680 Rint1-003 retained_intron Mus_musculus 0 1382
ENSMUST00000132260 Rint1-007 retained_intron Mus_musculus 0 459

Loading