C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info

Description: keratin 82
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000257974 KRT82-001 ENSG00000161850 9606 - 12:52393931-52406355 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; KidneyOvaryPlacentaTestisENST00000257974
Transcript ID Kidney Ovary Placenta Testis
ENST00000257974 0.166±0.00 0.024±0.00 0.067±0.03 0.031±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00033Q CIL_00033Q_0006 CGP 12:52377812-52406355
CIL_00033Q CIL_00033Q_0007 CGP 12:52393931-52434525

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005198 IEA structural molecule activity
GO:0005882 IEA intermediate filament
GO:0008150 ND biological_process
GO:0030280 NAS structural constituent of epidermis
GO:0045095 IDA keratin filament

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000023713 Krt82-201 protein_coding Mus_musculus 0 1576
ENSMUST00000088049 Krt86-201 protein_coding Mus_musculus 0 555
ENSMUST00000061185 Krt81-201 protein_coding Mus_musculus 0 538
ENSMUST00000023718 5430421N21Rik-001 protein_coding Mus_musculus 0 510
ENSMUST00000159029 5430421N21Rik-002 retained_intron Mus_musculus 0 309
ENSMUST00000077902 Gfap-201 protein_coding Mus_musculus 0.000000002 69
ENSMUST00000067444 Gfap-001 protein_coding Mus_musculus 0.000000002 69
ENSDART00000064983 krt1-c5-201 protein_coding Danio_rerio 0.00001 57
ENSDART00000139066 krt1-c5-001 protein_coding Danio_rerio 0.00001 57

Loading