C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: methionyl-tRNA synthetase
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000262027 MARS-003 ENSG00000166986 9606 + 12:57487957-57516649 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000262027
Transcript ID Adipose Adrenal Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000262027 18.255±0.00 27.355±0.00 14.877±5.48 10.299±3.72 7.109±3.80 8.850±7.21 15.259±11.49 9.352±5.17 11.305±8.45 24.146±19.13 24.145±11.54 27.526±5.15 38.534±4.17

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
GO:0000049 IEA tRNA binding
GO:0000166 IEA nucleotide binding
GO:0004812 IEA aminoacyl-tRNA ligase activity
GO:0004825 TAS:IEA methionine-tRNA ligase activity
GO:0005524 IEA ATP binding
GO:0005737 IDA:IEA cytoplasm
GO:0005739 IEA mitochondrion
GO:0005829 TAS cytosol
GO:0006418 TAS:IEA tRNA aminoacylation for protein translation
GO:0006431 IEA methionyl-tRNA aminoacylation
GO:0010467 TAS gene expression
GO:0016020 IDA membrane
GO:0070062 IDA extracellular vesicular exosome

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000037290 Mars-001 protein_coding Mus_musculus 0 3133
ENSMUST00000171564 Mars-201 protein_coding Mus_musculus 0 3044
ENSMUST00000145275 Mars-002 retained_intron Mus_musculus 0 2852
ENSMUST00000134778 Mars-004 protein_coding Mus_musculus 0 490
ENSMUST00000128369 Mars-003 retained_intron Mus_musculus 0 316

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