C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: RasGEF domain family, member 1B
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000264400 RASGEF1B-001 ENSG00000138670 9606 - 4:81427065-81471915 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000264400
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000264400 1.580±0.00 0.899±0.00 0.711±0.00 1.671±0.08 1.543±0.95 0.536±0.00 0.552±0.00 1.496±0.06 1.634±1.22 4.531±0.66 0.583±0.00 1.161±0.55 0.857±0.20 0.955±0.59

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_000086 CIL_000086_0002 CGP 4:81087370-82044244
CIL_0008G8 CIL_0008G8_0001 VISTA 4:81293869-81895630

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005085 IEA guanyl-nucleotide exchange factor activity
GO:0005088 IDA Ras guanyl-nucleotide exchange factor activity
GO:0005622 IEA intracellular
GO:0005768 IEA endosome
GO:0007264 IEA small GTPase mediated signal transduction
GO:0032320 IDA positive regulation of Ras GTPase activity
GO:0043547 IEA positive regulation of GTPase activity
GO:0051056 IEA regulation of small GTPase mediated signal transduction

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000031276 Rasgef1b-001 protein_coding Mus_musculus 0 2001
ENSMUST00000168092 Rasgef1b-002 protein_coding Mus_musculus 0 1988
ENSMUST00000166484 Rasgef1b-003 protein_coding Mus_musculus 0 1277

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