C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: RasGEF domain family, member 1B
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000166484 Rasgef1b-003 ENSMUSG00000029333 10090 - 5:99218774-99243240 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdrenalBrainColonMuscleOvaryPlacentaTestisENSMUST00000166484
Transcript ID Adrenal Brain Colon Muscle Ovary Placenta Testis
ENSMUST00000166484 1.810±0.00 9.584±0.00 8.169±1.47 0.057±0.05 6.703±0.00 5.848±2.47 2.320±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_000086 CIL_000086_0003 CGP 5:98929773-99252927
CIL_0008G8 CIL_0008G8_0002 VISTA 5:99067893-99670406

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005085 IEA guanyl-nucleotide exchange factor activity
GO:0007264 IEA small GTPase mediated signal transduction
GO:0043547 IEA positive regulation of GTPase activity

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000264400 RASGEF1B-001 protein_coding Homo_sapiens 0 1277
ENST00000335927 RASGEF1B-005 protein_coding Homo_sapiens 0 1513
ENST00000504863 RASGEF1B-006 protein_coding Homo_sapiens 0 822
ENST00000509081 RASGEF1B-002 protein_coding Homo_sapiens 0 1286

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