Institute of Cardiovascular Regeneration Webtool Repository

C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Accession	Transcript Name	Contained in Gene	Tax ID	Strand	Position	Biotype
Transcript Info
Description:	cut-like homeobox 1
ENST00000292538	CUX1-001	ENSG00000257923	9606	+	7:101816005-102283957	protein_coding

Expression Patterns

Transcript ID	Adipose	Adrenal	Brain	Breast	Colon	Heart	Kidney	Liver	Lung	Ovary	Placenta	Testis
ENST00000292538	6.749±0.00	7.627±0.00	15.192±0.00	10.547±3.46	9.068±3.25	11.784±6.71	10.198±9.20	3.675±0.39	18.131±0.00	21.054±6.82	14.402±0.72	12.175±0.00

Conserved Regions
Region ID	Sub-Region	Region Type	Position
CIL_0002FZ	CIL_0002FZ_0002	CGP	7:101815904-102321711

Gene Ontology
GO ID	Evidence Type	GO Description
GO:0006891	IEA	intra-Golgi vesicle-mediated transport
GO:0030173	IEA	integral component of Golgi membrane

Homologs
ENSEMBL Accession	Gene Name	Biotype	Species	E-Value	Bit Score
ENSMUST00000176216	Cux1-004	protein_coding	Mus_musculus	0	2447
ENSMUST00000176745	Cux1-006	protein_coding	Mus_musculus	0	2438
ENSMUST00000177297	Cux1-009	nonsense_mediated_decay	Mus_musculus	0	2305
ENSMUST00000004097	Cux1-001	protein_coding	Mus_musculus	0	1653
ENSMUST00000175975	Cux1-008	protein_coding	Mus_musculus	0	1578
ENSMUST00000176172	Cux1-011	protein_coding	Mus_musculus	0	1493
ENSMUST00000176778	Cux1-005	protein_coding	Mus_musculus	0	1454
ENSMUST00000175998	Cux1-013	protein_coding	Mus_musculus	0	1360
ENSMUST00000175918	Cux1-003	nonsense_mediated_decay	Mus_musculus	0	1319
ENSMUST00000176486	Cux1-012	protein_coding	Mus_musculus	0	1077
ENSMUST00000176501	Cux1-007	retained_intron	Mus_musculus	0	789
ENSMUST00000176423	Cux1-017	protein_coding	Mus_musculus	0	532
ENSMUST00000177305	Cux1-002	retained_intron	Mus_musculus	0	300
ENSDART00000129464	cux2b-201	protein_coding	Danio_rerio	0.000000007	68
ENSDART00000134378	cux2b-002	protein_coding	Danio_rerio	0.000000007	68

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