C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_0002FZ_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSDARG00000043134-ENSDARG00000090421 CGP 7955 15:2511389-2574001
GeneTranscriptPositionBiotype
ENSDARG00000043134 (cux1b)
cut-like homeobox 1b 		ENSDART00000063329 (cux1b-001) 2511389-2534904 protein_coding
ENSDART00000138469 (cux1b-002) 2525810-2534629 protein_coding
ENSDARG00000090421 (SH2B2)
SH2B adaptor protein 2 		ENSDART00000073642 (SH2B2-201) 2551282-2574001 protein_coding
CIL_0002FZ_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000257923-ENSG00000160999 CGP 9606 7:101815904-102321711
GeneTranscriptPositionBiotype
ENSG00000160999 (SH2B2)
SH2B adaptor protein 2 		ENST00000444095 (SH2B2-003) 102286888-102301279 protein_coding
ENST00000536178 (SH2B2-001) 102285155-102321711 protein_coding
ENST00000617975 (SH2B2-002) 102285091-102314547 nonsense_mediated_decay
ENSG00000252824 (SNORA48)
Small nucleolar RNA SNORA48 		ENST00000517015 (SNORA48.1-212) 102194076-102194164 snoRNA
ENSG00000257923 (CUX1)
cut-like homeobox 1 		ENST00000292535 (CUX1-004) 101817602-102258233 protein_coding
ENST00000292538 (CUX1-001) 101816005-102283957 protein_coding
ENST00000360264 (CUX1-005) 101816011-102258233 protein_coding
ENST00000393824 (CUX1-016) 101816008-102283478 protein_coding
ENST00000425244 (CUX1-018) 101816021-102283957 protein_coding
ENST00000437600 (CUX1-201) 101815904-102283957 protein_coding
ENST00000465461 (CUX1-014) 102104353-102125778 processed_transcript
ENST00000485792 (CUX1-013) 102104437-102115670 retained_intron
ENST00000487284 (CUX1-010) 102274174-102283932 retained_intron
ENST00000497815 (CUX1-012) 101815960-102112010 retained_intron
ENST00000546411 (CUX1-008) 101817640-102249042 protein_coding
ENST00000547394 (CUX1-002) 101816009-102283957 protein_coding
ENST00000549414 (CUX1-006) 101817640-102249042 protein_coding
ENST00000550008 (CUX1-007) 101817640-102249042 protein_coding
ENST00000556210 (CUX1-009) 101817640-102249042 protein_coding
ENST00000558469 (CUX1-020) 101818921-102111726 processed_transcript
ENST00000558836 (CUX1-021) 101932343-102283912 processed_transcript
ENST00000560541 (CUX1-019) 101913104-102283957 processed_transcript
ENST00000606749 (CUX1-022) 101959390-102104459 processed_transcript
ENST00000607092 (CUX1-011) 101816008-101916587 retained_intron
ENST00000622516 (CUX1-003) 101815939-102283957 protein_coding
ENSG00000259294 (CTA-339C12.1)
 ENST00000560499 (CTA-339C12.1-001) 101822247-101824729 antisense
ENSG00000261535 (CTA-305I2.1)
 ENST00000566572 (CTA-305I2.1-001) 102153355-102154463 antisense
ENSG00000264675 (MIR4285)
microRNA 4285 		ENST00000581001 (MIR4285-201) 102293103-102293187 miRNA
ENSG00000272219 (CTB-181H17.1)
 ENST00000606640 (CTB-181H17.1-001) 101960116-101961894 sense_intronic
ENSG00000278586 (CTA-313A17.5)
 ENST00000621922 (CTA-313A17.5-001) 102264706-102264979 processed_pseudogene
ENSG00000279724 (AC005086.1)
 ENST00000624939 (AC005086.1-201) 102188599-102188828 pseudogene
ENSG00000280004 (AC005086.2)
 ENST00000624984 (AC005086.2-201) 102186819-102187039 pseudogene
ENSG00000280404 (AC005086.3)
 ENST00000623065 (AC005086.3-201) 102161120-102161337 pseudogene

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0002FZ_0001ENSDARG00000043134ENSDART00000063329ENSDART00000138469ENSDARG00000090421ENSDART00000073642CIL_0002FZ_0002ENSG00000160999ENST00000444095ENST00000536178ENST00000617975ENSG00000252824ENST00000517015ENSG00000257923ENST00000292535ENST00000292538ENST00000360264ENST00000393824ENST00000425244ENST00000437600ENST00000465461ENST00000485792ENST00000487284ENST00000497815ENST00000546411ENST00000547394ENST00000549414ENST00000550008ENST00000556210ENST00000558469ENST00000558836ENST00000560541ENST00000606749ENST00000607092ENST00000622516ENSG00000259294ENST00000560499ENSG00000261535ENST00000566572ENSG00000264675ENST00000581001ENSG00000272219ENST00000606640ENSG00000278586ENST00000621922ENSG00000279724ENST00000624939ENSG00000280004ENST00000624984ENSG00000280404ENST00000623065
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0002FZ_0001ENSDARG00000043134ENSDART00000063329ENSDART00000138469ENSDARG00000090421ENSDART00000073642CIL_0002FZ_0002ENSG00000160999ENST00000444095ENST00000536178ENST00000617975ENSG00000252824ENST00000517015ENSG00000257923ENST00000292535ENST00000292538ENST00000360264ENST00000425244ENST00000437600ENST00000487284ENST00000497815ENST00000550008ENST00000556210ENST00000558469ENST00000560541ENST00000622516ENSG00000259294ENST00000560499ENSG00000261535ENST00000566572ENSG00000264675ENST00000581001ENSG00000272219ENST00000606640ENSG00000278586ENST00000621922ENSG00000279724ENST00000624939ENSG00000280004ENST00000624984ENSG00000280404ENST00000623065
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSDARG00000043134 ENSDART00000063329 N/A N/A N/A 6.495±0.16 N/A N/A 8.118±3.37 5.591±0.00 0.273±0.00 N/A 3.408±0.00 N/A N/A N/A
ENSDART00000138469 N/A N/A N/A N/A N/A N/A 2.172±0.00 N/A 0.175±0.00 N/A N/A N/A N/A N/A
ENSDARG00000090421 ENSDART00000073642 N/A N/A N/A 5.471±2.76 N/A N/A 0.687±0.36 0.495±0.16 0.281±0.00 N/A 0.245±0.00 N/A N/A N/A
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000160999 ENST00000444095 N/A N/A N/A N/A N/A N/A 0.376±0.00 N/A N/A N/A N/A N/A N/A N/A
ENST00000536178 1.539±0.00 6.774±0.00 0.047±0.00 0.691±0.27 2.653±0.00 0.213±0.00 N/A 1.611±0.00 0.326±0.00 N/A N/A 3.231±2.75 2.051±0.65 1.243±0.00
ENST00000617975 N/A N/A N/A N/A N/A 1.317±0.00 N/A N/A N/A 0.356±0.00 N/A N/A 2.089±0.00 N/A
ENSG00000252824 ENST00000517015 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 2.622±0.00 N/A N/A 0.277±0.00
ENSG00000257923 ENST00000292535 1.708±0.00 1.598±0.00 N/A 1.083±0.00 N/A 2.007±0.00 N/A 1.371±0.00 0.827±0.15 3.507±0.00 N/A N/A 1.826±0.25 N/A
ENST00000292538 6.749±0.00 7.627±0.00 N/A 15.192±0.00 10.547±3.46 9.068±3.25 11.784±6.71 10.198±9.20 3.675±0.39 18.131±0.00 N/A 21.054±6.82 14.402±0.72 12.175±0.00
ENST00000360264 1.548±0.00 N/A 2.723±0.00 N/A 2.378±0.04 1.955±0.00 1.149±0.00 0.504±0.00 2.037±0.00 1.765±0.00 3.493±2.33 3.775±1.54 3.510±2.41 1.753±0.00
ENST00000393824 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000425244 7.018±0.00 N/A N/A N/A N/A 9.076±0.00 N/A N/A 2.573±0.00 N/A N/A N/A N/A N/A
ENST00000437600 N/A N/A N/A N/A N/A N/A N/A N/A N/A 2.617±0.00 N/A 11.488±1.93 10.167±0.00 N/A
ENST00000465461 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000485792 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000487284 N/A N/A N/A N/A N/A N/A N/A N/A 5.122±0.00 N/A N/A N/A N/A N/A
ENST00000497815 N/A N/A N/A 5.484±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000546411 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000547394 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000549414 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000550008 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 1.985±0.00
ENST00000556210 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 2.412±0.00
ENST00000558469 N/A N/A N/A N/A N/A 14.449±0.00 N/A 4.701±0.00 N/A 13.856±0.00 9.191±0.00 20.834±0.00 N/A N/A
ENST00000558836 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000560541 N/A N/A 5.120±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000606749 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000607092 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000622516 N/A N/A N/A 3.022±0.00 N/A N/A N/A 2.729±0.00 3.027±0.10 1.898±0.00 2.469±0.00 21.187±0.00 13.073±0.00 4.413±0.00
ENSG00000259294 ENST00000560499 N/A 0.026±0.00 N/A 0.114±0.00 0.170±0.00 0.239±0.00 0.169±0.12 N/A 0.285±0.00 1.315±0.00 N/A 0.742±0.48 0.068±0.00 0.071±0.00
ENSG00000261535 ENST00000566572 0.072±0.00 0.098±0.00 0.211±0.00 0.260±0.00 0.052±0.00 0.412±0.00 0.068±0.05 0.025±0.00 0.530±0.46 N/A 0.360±0.34 1.414±1.10 1.300±0.00 0.459±0.41
ENSG00000264675 ENST00000581001 N/A N/A N/A N/A 0.359±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000272219 ENST00000606640 0.015±0.00 0.183±0.00 0.833±0.00 0.125±0.03 0.392±0.31 0.563±0.53 0.069±0.04 0.084±0.00 0.345±0.30 0.324±0.26 0.048±0.00 0.235±0.22 0.113±0.00 0.119±0.03
ENSG00000278586 ENST00000621922 N/A N/A N/A 0.162±0.00 0.233±0.00 N/A N/A N/A N/A N/A N/A 0.894±0.00 N/A N/A
ENSG00000279724 ENST00000624939 0.176±0.00 0.970±0.00 N/A 0.302±0.00 0.618±0.00 3.016±2.77 0.244±0.00 0.087±0.00 N/A 0.758±0.00 N/A 1.134±0.64 0.926±0.00 0.494±0.00
ENSG00000280004 ENST00000624984 0.235±0.00 N/A N/A N/A N/A 0.142±0.00 N/A N/A N/A N/A N/A 1.467±0.63 0.819±0.00 2.987±0.00
ENSG00000280404 ENST00000623065 0.390±0.00 0.788±0.00 1.557±0.00 0.343±0.00 0.307±0.00 0.186±0.00 0.096±0.00 0.100±0.00 0.528±0.00 N/A N/A N/A N/A 0.279±0.00

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