C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: sushi, von Willebrand factor type A, EGF and pentraxin domain containing 1
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000297826 SVEP1-004 ENSG00000165124 9606 - 9:110365256-110427758 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000297826
Transcript ID Adipose Adrenal Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000297826 38.791±0.00 16.149±0.00 0.323±0.00 6.586±4.64 26.197±0.00 2.107±0.00 2.343±2.13 0.756±0.00 14.085±0.00 2.089±0.00 1.613±1.28 33.048±12.81 4.359±3.86

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0007PS CIL_0007PS_0001 VISTA 9:109825819-110428061
CIL_0007IH CIL_0007IH_0001 CGP 9:110303521-110579880
CIL_00016G CIL_00016G_0001 CGP 9:110365251-110801579

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005509 IEA calcium ion binding
GO:0005515 IEA protein binding
GO:0005576 IEA extracellular region
GO:0005737 IEA cytoplasm
GO:0007155 IEA cell adhesion
GO:0016020 IEA membrane

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000042850 Svep1-001 protein_coding Mus_musculus 0 4381

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