C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_00016G_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000165124-ENSG00000030304 CGP 9606 9:110365251-110801579
GeneTranscriptPositionBiotype
ENSG00000030304 (MUSK)
muscle, skeletal, receptor tyrosine kinase 		ENST00000189978 (MUSK-201) 110668771-110800998 protein_coding
ENST00000374438 (MUSK-004) 110775347-110788101 protein_coding
ENST00000374439 (MUSK-003) 110687217-110706188 protein_coding
ENST00000374440 (MUSK-202) 110668859-110800998 protein_coding
ENST00000374448 (MUSK-001) 110668771-110800998 protein_coding
ENST00000416899 (MUSK-002) 110668779-110801579 protein_coding
ENSG00000165124 (SVEP1)
sushi, von Willebrand factor type A, EGF and pentraxin domain containing 1 		ENST00000297826 (SVEP1-004) 110365256-110427758 protein_coding
ENST00000374461 (SVEP1-001) 110475883-110579880 protein_coding
ENST00000374469 (SVEP1-003) 110365256-110579738 protein_coding
ENST00000401783 (SVEP1-201) 110365251-110579880 protein_coding
ENST00000467821 (SVEP1-002) 110442479-110550054 processed_transcript
ENST00000476205 (SVEP1-005) 110376811-110379378 processed_transcript
ENSG00000206658 (RNU6-1039P)
RNA, U6 small nuclear 1039, pseudogene 		ENST00000383931 (RNU6-1039P-201) 110369592-110369698 snRNA
ENSG00000212254 (RNU6-124P)
RNA, U6 small nuclear 124, pseudogene 		ENST00000390952 (RNU6-124P-201) 110539690-110539798 snRNA
ENSG00000232896 (RP11-410K21.2)
 ENST00000451108 (RP11-410K21.2-001) 110599475-110605219 lincRNA
CIL_00016G_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000028369-ENSMUSG00000057280 CGP 10090 4:58042442-58374303
GeneTranscriptPositionBiotype
ENSMUSG00000028369 (Svep1)
sushi, von Willebrand factor type A, EGF and pentraxin domain containing 1 		ENSMUST00000042850 (Svep1-001) 58042442-58206596 protein_coding
ENSMUST00000128783 (Svep1-002) 58144820-58206859 processed_transcript
ENSMUST00000146329 (Svep1-003) 58178103-58206688 processed_transcript
ENSMUST00000149152 (Svep1-004) 58143459-58206612 processed_transcript
ENSMUSG00000057280 (Musk)
muscle, skeletal, receptor tyrosine kinase 		ENSMUST00000081919 (Musk-201) 58285960-58374302 protein_coding
ENSMUST00000084578 (Musk-002) 58285962-58374303 protein_coding
ENSMUST00000098057 (Musk-202) 58285962-58374303 protein_coding
ENSMUST00000098059 (Musk-203) 58285962-58374302 protein_coding
ENSMUST00000102893 (Musk-001) 58285962-58374303 protein_coding
ENSMUST00000135879 (Musk-003) 58286175-58304324 processed_transcript
ENSMUST00000177951 (Musk-204) 58285962-58374302 protein_coding
ENSMUST00000179951 (Musk-205) 58285962-58374302 protein_coding
ENSMUSG00000097249 (Gm26889)
predicted gene, 26889 		ENSMUST00000181523 (Gm26889-201) 58178247-58206635 lincRNA

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_00016G_0001ENSG00000030304ENST00000189978ENST00000374438ENST00000374439ENST00000374440ENST00000374448ENST00000416899ENSG00000165124ENST00000297826ENST00000374461ENST00000374469ENST00000401783ENST00000467821ENST00000476205ENSG00000206658ENST00000383931ENSG00000212254ENST00000390952ENSG00000232896ENST00000451108CIL_00016G_0002ENSMUSG00000028369ENSMUST00000042850ENSMUST00000128783ENSMUST00000146329ENSMUST00000149152ENSMUSG00000057280ENSMUST00000081919ENSMUST00000084578ENSMUST00000098057ENSMUST00000098059ENSMUST00000102893ENSMUST00000135879ENSMUST00000177951ENSMUST00000179951ENSMUSG00000097249ENSMUST00000181523
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_00016G_0001ENSG00000030304ENST00000189978ENST00000374438ENST00000374439ENST00000374440ENST00000374448ENST00000416899ENSG00000165124ENST00000297826ENST00000374461ENST00000374469ENST00000401783ENST00000467821ENSG00000206658ENST00000383931ENSG00000212254ENST00000390952ENSG00000232896ENST00000451108CIL_00016G_0002ENSMUSG00000028369ENSMUST00000042850ENSMUSG00000057280ENSMUST00000081919ENSMUST00000084578ENSMUST00000098059ENSMUST00000102893ENSMUST00000135879ENSMUST00000177951ENSMUST00000179951ENSMUSG00000097249ENSMUST00000181523
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000030304 ENST00000189978 N/A N/A N/A N/A 0.022±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000374438 N/A N/A N/A 0.179±0.00 N/A N/A N/A N/A N/A N/A N/A 0.019±0.00 0.090±0.00 N/A
ENST00000374439 N/A N/A N/A N/A N/A N/A N/A N/A 0.837±0.00 2.106±0.00 N/A 0.070±0.00 0.088±0.00 N/A
ENST00000374440 0.019±0.00 N/A 0.022±0.00 0.030±0.00 0.103±0.09 N/A 0.105±0.00 N/A 0.028±0.00 N/A N/A 0.043±0.03 0.116±0.06 N/A
ENST00000374448 N/A N/A N/A N/A N/A 0.271±0.00 N/A N/A N/A 0.373±0.00 0.131±0.00 N/A N/A N/A
ENST00000416899 N/A N/A N/A N/A 0.302±0.00 0.774±0.00 0.268±0.00 N/A 0.192±0.00 0.141±0.00 0.205±0.16 N/A 0.052±0.00 0.459±0.02
ENSG00000165124 ENST00000297826 38.791±0.00 16.149±0.00 N/A 0.323±0.00 6.586±4.64 26.197±0.00 2.107±0.00 2.343±2.13 0.756±0.00 14.085±0.00 2.089±0.00 1.613±1.28 33.048±12.81 4.359±3.86
ENST00000374461 N/A N/A N/A 0.271±0.00 N/A N/A N/A N/A N/A N/A N/A 1.401±0.00 N/A N/A
ENST00000374469 26.541±0.00 N/A 0.259±0.00 0.233±0.00 3.195±0.00 10.949±0.00 0.966±0.00 1.040±0.00 1.272±1.15 3.999±1.02 N/A 0.870±0.00 10.260±3.43 2.256±0.00
ENST00000401783 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.326±0.00 N/A 0.062±0.00
ENST00000467821 N/A N/A N/A N/A N/A N/A 0.486±0.00 N/A N/A N/A N/A N/A N/A N/A
ENST00000476205 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000206658 ENST00000383931 0.530±0.00 N/A N/A N/A 0.895±0.00 0.167±0.00 N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000212254 ENST00000390952 N/A 0.985±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000232896 ENST00000451108 0.047±0.00 0.199±0.00 N/A 0.027±0.00 0.127±0.00 0.258±0.00 0.090±0.00 0.226±0.00 0.043±0.00 N/A 0.021±0.00 0.212±0.00 0.070±0.01 0.045±0.00
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000028369 ENSMUST00000042850 6.035±1.80 1.265±0.53 11.717±1.13 0.408±0.25 6.386±2.12 3.219±1.98 1.332±0.57 4.176±0.86 0.140±0.11 8.769±1.12 0.631±0.09 2.067±0.64 3.051±1.23 0.298±0.17
ENSMUST00000128783 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000146329 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000149152 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUSG00000057280 ENSMUST00000081919 0.009±0.00 0.020±0.02 N/A N/A N/A N/A 0.029±0.00 0.035±0.01 0.004±0.00 0.015±0.00 N/A 0.045±0.00 N/A 0.080±0.06
ENSMUST00000084578 0.017±0.00 0.048±0.04 N/A 0.008±0.00 0.017±0.00 0.512±0.03 0.052±0.02 0.141±0.03 0.017±0.03 0.092±0.08 N/A 0.311±0.17 N/A 0.048±0.01
ENSMUST00000098057 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000098059 N/A N/A N/A N/A N/A N/A 0.015±0.00 0.022±0.00 N/A N/A N/A 0.064±0.03 0.356±0.26 N/A
ENSMUST00000102893 0.041±0.03 0.029±0.02 N/A 0.024±0.01 0.169±0.13 0.992±0.28 N/A 0.133±0.00 0.005±0.00 0.167±0.17 N/A 0.221±0.16 0.189±0.18 0.073±0.03
ENSMUST00000135879 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.075±0.00 N/A 0.076±0.00
ENSMUST00000177951 N/A N/A N/A N/A N/A 0.282±0.00 0.057±0.00 0.121±0.01 N/A N/A N/A 0.208±0.10 0.042±0.02 N/A
ENSMUST00000179951 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.354±0.00 N/A N/A
ENSMUSG00000097249 ENSMUST00000181523 N/A 1.891±0.33 N/A N/A 8.218±0.00 3.898±0.01 N/A N/A 0.076±0.02 4.967±0.00 N/A 2.325±0.61 N/A N/A

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