C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_0007IH_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000204193-ENSG00000165124 CGP 9606 9:110303521-110579880
GeneTranscriptPositionBiotype
ENSG00000165124 (SVEP1)
sushi, von Willebrand factor type A, EGF and pentraxin domain containing 1 		ENST00000297826 (SVEP1-004) 110365256-110427758 protein_coding
ENST00000374461 (SVEP1-001) 110475883-110579880 protein_coding
ENST00000374469 (SVEP1-003) 110365256-110579738 protein_coding
ENST00000401783 (SVEP1-201) 110365251-110579880 protein_coding
ENST00000467821 (SVEP1-002) 110442479-110550054 processed_transcript
ENST00000476205 (SVEP1-005) 110376811-110379378 processed_transcript
ENSG00000204193 (TXNDC8)
thioredoxin domain containing 8 (spermatozoa) 		ENST00000374507 (TXNDC8-002) 110322461-110337847 protein_coding
ENST00000374510 (TXNDC8-001) 110303587-110337808 protein_coding
ENST00000374511 (TXNDC8-201) 110303521-110337884 protein_coding
ENST00000423740 (TXNDC8-004) 110303626-110337808 protein_coding
ENSG00000206658 (RNU6-1039P)
RNA, U6 small nuclear 1039, pseudogene 		ENST00000383931 (RNU6-1039P-201) 110369592-110369698 snRNA
ENSG00000212254 (RNU6-124P)
RNA, U6 small nuclear 124, pseudogene 		ENST00000390952 (RNU6-124P-201) 110539690-110539798 snRNA
CIL_0007IH_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000038709-ENSMUSG00000028369 CGP 10090 4:57984027-58206859
GeneTranscriptPositionBiotype
ENSMUSG00000028369 (Svep1)
sushi, von Willebrand factor type A, EGF and pentraxin domain containing 1 		ENSMUST00000042850 (Svep1-001) 58042442-58206596 protein_coding
ENSMUST00000128783 (Svep1-002) 58144820-58206859 processed_transcript
ENSMUST00000146329 (Svep1-003) 58178103-58206688 processed_transcript
ENSMUST00000149152 (Svep1-004) 58143459-58206612 processed_transcript
ENSMUSG00000038709 (Txndc8)
thioredoxin domain containing 8 		ENSMUST00000102897 (Txndc8-001) 57984027-58009124 protein_coding
ENSMUST00000139256 (Txndc8-003) 57984029-58000310 protein_coding
ENSMUST00000154540 (Txndc8-002) 57984027-58009025 processed_transcript
ENSMUSG00000097249 (Gm26889)
predicted gene, 26889 		ENSMUST00000181523 (Gm26889-201) 58178247-58206635 lincRNA

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0007IH_0001ENSG00000165124ENST00000297826ENST00000374461ENST00000374469ENST00000401783ENST00000467821ENST00000476205ENSG00000204193ENST00000374507ENST00000374510ENST00000374511ENST00000423740ENSG00000206658ENST00000383931ENSG00000212254ENST00000390952CIL_0007IH_0002ENSMUSG00000028369ENSMUST00000042850ENSMUST00000128783ENSMUST00000146329ENSMUST00000149152ENSMUSG00000038709ENSMUST00000102897ENSMUST00000139256ENSMUST00000154540ENSMUSG00000097249ENSMUST00000181523
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0007IH_0001ENSG00000165124ENST00000297826ENST00000374461ENST00000374469ENST00000401783ENST00000467821ENSG00000204193ENST00000374507ENST00000374511ENSG00000206658ENST00000383931ENSG00000212254ENST00000390952CIL_0007IH_0002ENSMUSG00000028369ENSMUST00000042850ENSMUSG00000038709ENSMUST00000102897ENSMUST00000139256ENSMUST00000154540ENSMUSG00000097249ENSMUST00000181523
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000165124 ENST00000297826 38.791±0.00 16.149±0.00 N/A 0.323±0.00 6.586±4.64 26.197±0.00 2.107±0.00 2.343±2.13 0.756±0.00 14.085±0.00 2.089±0.00 1.613±1.28 33.048±12.81 4.359±3.86
ENST00000374461 N/A N/A N/A 0.271±0.00 N/A N/A N/A N/A N/A N/A N/A 1.401±0.00 N/A N/A
ENST00000374469 26.541±0.00 N/A 0.259±0.00 0.233±0.00 3.195±0.00 10.949±0.00 0.966±0.00 1.040±0.00 1.272±1.15 3.999±1.02 N/A 0.870±0.00 10.260±3.43 2.256±0.00
ENST00000401783 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.326±0.00 N/A 0.062±0.00
ENST00000467821 N/A N/A N/A N/A N/A N/A 0.486±0.00 N/A N/A N/A N/A N/A N/A N/A
ENST00000476205 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000204193 ENST00000374507 N/A N/A 0.046±0.00 0.013±0.00 N/A N/A N/A N/A N/A N/A N/A 0.025±0.00 0.024±0.00 0.723±0.00
ENST00000374510 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000374511 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 5.447±0.00
ENST00000423740 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000206658 ENST00000383931 0.530±0.00 N/A N/A N/A 0.895±0.00 0.167±0.00 N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000212254 ENST00000390952 N/A 0.985±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000028369 ENSMUST00000042850 6.035±1.80 1.265±0.53 11.717±1.13 0.408±0.25 6.386±2.12 3.219±1.98 1.332±0.57 4.176±0.86 0.140±0.11 8.769±1.12 0.631±0.09 2.067±0.64 3.051±1.23 0.298±0.17
ENSMUST00000128783 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000146329 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000149152 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUSG00000038709 ENSMUST00000102897 N/A N/A N/A N/A N/A N/A 0.136±0.00 N/A N/A N/A N/A 0.060±0.00 N/A 120.438±45.40
ENSMUST00000139256 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.188±0.00 N/A N/A
ENSMUST00000154540 N/A N/A N/A N/A N/A N/A 0.070±0.00 N/A N/A N/A N/A N/A N/A N/A
ENSMUSG00000097249 ENSMUST00000181523 N/A 1.891±0.33 N/A N/A 8.218±0.00 3.898±0.01 N/A N/A 0.076±0.02 4.967±0.00 N/A 2.325±0.61 N/A N/A

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