C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: sushi, von Willebrand factor type A, EGF and pentraxin domain containing 1
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000165124 SVEP1 9606 - 9:110365251-110579880 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000297826 SVEP1-004 110365256-110427758 protein_coding
  ENST00000374461 SVEP1-001 110475883-110579880 protein_coding
  ENST00000374469 SVEP1-003 110365256-110579738 protein_coding
  ENST00000401783 SVEP1-201 110365251-110579880 protein_coding
  ENST00000467821 SVEP1-002 110442479-110550054 processed_transcript
  ENST00000476205 SVEP1-005 110376811-110379378 processed_transcript

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000297826ENST00000374461ENST00000374469ENST00000401783ENST00000467821
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000297826 38.791±0.00 16.149±0.00 N/A 0.323±0.00 6.586±4.64 26.197±0.00 2.107±0.00 2.343±2.13 0.756±0.00 14.085±0.00 2.089±0.00 1.613±1.28 33.048±12.81 4.359±3.86
ENST00000374461 N/A N/A N/A 0.271±0.00 N/A N/A N/A N/A N/A N/A N/A 1.401±0.00 N/A N/A
ENST00000374469 26.541±0.00 N/A 0.259±0.00 0.233±0.00 3.195±0.00 10.949±0.00 0.966±0.00 1.040±0.00 1.272±1.15 3.999±1.02 N/A 0.870±0.00 10.260±3.43 2.256±0.00
ENST00000401783 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.326±0.00 N/A 0.062±0.00
ENST00000467821 N/A N/A N/A N/A N/A N/A 0.486±0.00 N/A N/A N/A N/A N/A N/A N/A

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0007PS CIL_0007PS_0001 VISTA 9:109825819-110428061
CIL_0007IH CIL_0007IH_0001 CGP 9:110303521-110579880
CIL_00016G CIL_00016G_0001 CGP 9:110365251-110801579

Gene Ontology
GO IDEvidence TypeGO Description
GO:0003682 IEA chromatin binding
GO:0005509 IEA calcium ion binding
GO:0005515 IEA protein binding
GO:0005576 IEA extracellular region
GO:0005737 IEA cytoplasm
GO:0007155 IEA cell adhesion
GO:0016020 IEA membrane

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000013526 SVEP1 sushi, von Willebrand factor type A, EGF and pentraxin domain containing 1 protein_coding Danio_rerio
ENSMUSG00000028369 Svep1 sushi, von Willebrand factor type A, EGF and pentraxin domain containing 1 protein_coding Mus_musculus

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