C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: protocadherin 11 X-linked
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000298274 PCDH11X-005 ENSG00000102290 9606 + X:91779261-91884007 processed_transcript

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000298274
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000298274 0.035±0.00 0.038±0.00 0.020±0.00 0.387±0.00 0.038±0.01 0.023±0.00 0.010±0.01 0.008±0.00 0.088±0.07 0.163±0.15 0.008±0.00 0.117±0.13 0.061±0.02 0.027±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0007B8 CIL_0007B8_0001 CGP X:91434595-92623230

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000113358 Pcdh11x-001 protein_coding Mus_musculus 0 3273
ENSMUST00000113364 Pcdh11x-202 protein_coding Mus_musculus 0 3273
ENSMUST00000050239 Pcdh11x-201 protein_coding Mus_musculus 0 3243
ENSMUST00000155223 Pcdh11x-002 nonsense_mediated_decay Mus_musculus 0 593
ENSMUST00000145380 Ckmt1-003 retained_intron Mus_musculus 0.0000005 62

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