C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: H2A histone family, member V
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000308153 H2AFV-002 ENSG00000105968 9606 - 7:44834228-44848063 protein_coding

Homo sapiens EnsemblGRCh38

Genome
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Genes
Structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; BladderBrainBreastColonKidneyLungOvaryPlacentaTestisENST00000308153
Transcript ID Bladder Brain Breast Colon Kidney Lung Ovary Placenta Testis
ENST00000308153 6.389±0.00 12.336±0.00 18.229±8.04 27.124±15.05 10.766±0.00 20.778±10.14 34.819±15.49 33.130±9.42 31.344±10.18

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0000SB CIL_0000SB_0001 CGP 7:44796680-44848083
CIL_0007BS CIL_0007BS_0002 CGP 7:44826791-44885361

Gene Ontology

GO IDEvidence TypeGO Description
GO:0000786 IEA nucleosome
GO:0003674 ND molecular_function
GO:0003677 IEA DNA binding
GO:0005634 IDA:IEA nucleus
GO:0008150 ND biological_process
GO:0046982 IEA protein heterodimerization activity
GO:0070062 IDA extracellular vesicular exosome

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000109737 H2afv-001 protein_coding Mus_musculus 0 551
ENSMUST00000093346 H2afv-002 protein_coding Mus_musculus 0 259

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