C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: signal peptide, CUB domain, EGF-like 2
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000309263 SCUBE2-005 ENSG00000175356 9606 - 11:9020391-9091601 protein_coding

Homo sapiens EnsemblGRCh38

Genome
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Genes
Structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBreastColonHeartKidneyLungOvaryPlacentaTestisENST00000309263
Transcript ID Adipose Adrenal Breast Colon Heart Kidney Lung Ovary Placenta Testis
ENST00000309263 13.770±0.00 0.631±0.00 5.105±0.00 1.776±0.00 0.163±0.00 0.300±0.00 1.094±0.00 0.232±0.00 3.222±1.21 0.777±0.11

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0008Q2 CIL_0008Q2_0001 VISTA 11:8432154-9033661
CIL_000498 CIL_000498_0001 CGP 11:8980576-9138114
CIL_000499 CIL_000499_0001 CGP 11:9020391-9265390

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005509 IEA calcium ion binding
GO:0005515 IEA protein binding
GO:0005576 IEA extracellular region

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000007423 Scube2-004 protein_coding Mus_musculus 0 3620
ENSMUST00000132113 Scube2-002 processed_transcript Mus_musculus 0 1921
ENSMUST00000106729 Scube2-001 protein_coding Mus_musculus 0 1646
ENSMUST00000106728 Scube2-003 protein_coding Mus_musculus 0 1502
ENSMUST00000138946 Scube2-005 processed_transcript Mus_musculus 0 479

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