C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_0004A7_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000197406-ENSG00000078304 CGP 9606 14:101561351-101927989
GeneTranscriptPositionBiotype
ENSG00000078304 (PPP2R5C)
protein phosphatase 2, regulatory subunit B', gamma 		ENST00000328724 (PPP2R5C-002) 101761885-101927685 protein_coding
ENST00000334743 (PPP2R5C-001) 101809895-101927977 protein_coding
ENST00000350249 (PPP2R5C-005) 101809803-101927519 protein_coding
ENST00000422945 (PPP2R5C-201) 101761798-101927989 protein_coding
ENST00000445439 (PPP2R5C-006) 101809895-101912625 protein_coding
ENST00000553554 (PPP2R5C-016) 101786111-101797701 protein_coding
ENST00000553730 (PPP2R5C-008) 101809866-101883016 retained_intron
ENST00000553842 (PPP2R5C-021) 101823878-101836525 processed_transcript
ENST00000553890 (PPP2R5C-028) 101762928-101836451 protein_coding
ENST00000554137 (PPP2R5C-027) 101882161-101894517 nonsense_mediated_decay
ENST00000554147 (PPP2R5C-025) 101917769-101925449 retained_intron
ENST00000554442 (PPP2R5C-007) 101761862-101836573 protein_coding
ENST00000554504 (PPP2R5C-018) 101762905-101824229 processed_transcript
ENST00000555237 (PPP2R5C-024) 101906505-101921382 protein_coding
ENST00000556068 (PPP2R5C-004) 101761862-101821098 processed_transcript
ENST00000556086 (PPP2R5C-015) 101786121-101789896 processed_transcript
ENST00000556218 (PPP2R5C-012) 101882205-101912600 processed_transcript
ENST00000556260 (PPP2R5C-014) 101761870-101767049 protein_coding
ENST00000556307 (PPP2R5C-019) 101809837-101882205 nonsense_mediated_decay
ENST00000556373 (PPP2R5C-022) 101824838-101856885 processed_transcript
ENST00000556493 (PPP2R5C-020) 101823653-101856757 processed_transcript
ENST00000556570 (PPP2R5C-029) 101879222-101883562 processed_transcript
ENST00000556805 (PPP2R5C-011) 101889793-101893053 retained_intron
ENST00000556946 (PPP2R5C-017) 101809835-101836701 protein_coding
ENST00000557071 (PPP2R5C-023) 101909648-101925307 nonsense_mediated_decay
ENST00000557095 (PPP2R5C-009) 101809905-101906647 protein_coding
ENST00000557268 (PPP2R5C-003) 101761900-101925623 protein_coding
ENST00000557534 (PPP2R5C-010) 101883302-101901744 nonsense_mediated_decay
ENST00000557621 (PPP2R5C-026) 101809834-101893053 protein_coding
ENST00000557714 (PPP2R5C-030) 101809869-101836432 protein_coding
ENST00000557716 (PPP2R5C-013) 101883537-101912625 protein_coding
ENST00000561006 (PPP2R5C-031) 101901857-101912624 protein_coding
ENST00000607042 (PPP2R5C-032) 101824162-101824478 processed_transcript
ENSG00000197406 (DIO3)
deiodinase, iodothyronine, type III 		ENST00000510508 (DIO3-001) 101561351-101563452 protein_coding
ENSG00000207208 (RNU6-790P)
RNA, U6 small nuclear 790, pseudogene 		ENST00000384479 (RNU6-790P-201) 101803227-101803331 snRNA
ENSG00000241494 (RP11-796G6.1)
 ENST00000472981 (RP11-796G6.1-001) 101677943-101678380 processed_pseudogene
ENSG00000256705 (CTD-2017C7.1)
 ENST00000556205 (CTD-2017C7.1-001) 101833435-101839531 antisense
ENSG00000258404 (RP11-1029J19.5)
 ENST00000557778 (RP11-1029J19.5-001) 101634454-101731108 lincRNA
ENSG00000258512 (LINC00239)
long intergenic non-protein coding RNA 239 		ENST00000556973 (LINC00239-001) 101730437-101732522 lincRNA
ENSG00000258919 (RP11-1029J19.4)
 ENST00000553270 (RP11-1029J19.4-001) 101628984-101632530 lincRNA
ENSG00000259088 (CTD-2017C7.2)
 ENST00000554859 (CTD-2017C7.2-001) 101796555-101810321 antisense
ENSG00000259161 (CTD-2017C7.3)
 ENST00000553295 (CTD-2017C7.3-001) 101843394-101844122 processed_pseudogene

Homo sapiens Ensembl (GRCh38)

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CIL_0004A7_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000075707-ENSMUSG00000017843 CGP 10090 12:110279068-110583061
GeneTranscriptPositionBiotype
ENSMUSG00000017843 (Ppp2r5c)
protein phosphatase 2, regulatory subunit B', gamma 		ENSMUST00000084985 (Ppp2r5c-201) 110485739-110583061 protein_coding
ENSMUST00000109832 (Ppp2r5c-202) 110485739-110583061 protein_coding
ENSMUSG00000075707 (Dio3)
deiodinase, iodothyronine type III 		ENSMUST00000097228 (Dio3-201) 110279260-110280708 protein_coding
ENSMUST00000173014 (Dio3-001) 110279068-110281097 protein_coding

Mus musculus Ensembl (GRCm38)

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Structures from Ensembl
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Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0004A7_0001ENSG00000078304ENST00000328724ENST00000334743ENST00000350249ENST00000422945ENST00000445439ENST00000553554ENST00000553730ENST00000553842ENST00000553890ENST00000554137ENST00000554147ENST00000554442ENST00000554504ENST00000555237ENST00000556068ENST00000556086ENST00000556218ENST00000556260ENST00000556307ENST00000556373ENST00000556493ENST00000556570ENST00000556805ENST00000556946ENST00000557071ENST00000557095ENST00000557268ENST00000557534ENST00000557621ENST00000557714ENST00000557716ENST00000561006ENST00000607042ENSG00000197406ENST00000510508ENSG00000207208ENST00000384479ENSG00000241494ENST00000472981ENSG00000256705ENST00000556205ENSG00000258404ENST00000557778ENSG00000258512ENST00000556973ENSG00000258919ENST00000553270ENSG00000259088ENST00000554859ENSG00000259161ENST00000553295CIL_0004A7_0002ENSMUSG00000017843ENSMUST00000084985ENSMUST00000109832ENSMUSG00000075707ENSMUST00000097228ENSMUST00000173014
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0004A7_0001ENSG00000078304ENST00000328724ENST00000334743ENST00000350249ENST00000422945ENST00000445439ENST00000556068ENST00000556260ENST00000557095ENST00000557268ENSG00000197406ENST00000510508ENSG00000207208ENST00000384479ENSG00000241494ENST00000472981ENSG00000256705ENST00000556205ENSG00000258404ENST00000557778ENSG00000258512ENST00000556973ENSG00000258919ENST00000553270ENSG00000259088ENST00000554859ENSG00000259161ENST00000553295CIL_0004A7_0002ENSMUSG00000017843ENSMUST00000084985ENSMUST00000109832ENSMUSG00000075707ENSMUST00000097228ENSMUST00000173014
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000078304 ENST00000328724 7.081±0.00 8.467±0.00 3.419±0.00 8.038±2.68 6.772±0.11 8.041±3.24 7.513±4.58 4.698±1.54 4.018±0.59 7.793±2.30 5.365±1.88 6.762±1.97 4.598±0.45 13.976±1.38
ENST00000334743 4.066±0.00 5.825±0.00 N/A 7.356±0.00 4.993±0.00 8.763±0.00 4.236±2.26 3.769±0.00 2.157±0.00 3.571±0.26 2.057±0.00 6.742±1.02 2.927±0.02 9.354±0.00
ENST00000350249 4.183±0.00 4.667±0.00 N/A N/A N/A N/A 5.251±0.00 2.618±0.00 N/A N/A N/A N/A 1.440±0.00 N/A
ENST00000422945 N/A N/A N/A N/A N/A 2.711±0.00 N/A N/A 1.972±0.00 N/A N/A N/A N/A N/A
ENST00000445439 N/A N/A N/A N/A 10.681±0.00 N/A 4.787±0.00 2.785±0.00 4.369±0.00 8.493±0.23 N/A 4.065±0.00 5.062±1.70 N/A
ENST00000553554 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000553730 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000553842 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000553890 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000554137 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000554147 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000554442 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000554504 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000555237 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000556068 N/A N/A N/A N/A N/A 3.800±0.00 N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000556086 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000556218 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000556260 15.265±0.00 11.576±0.00 N/A 9.496±1.39 10.452±2.40 6.381±0.00 8.793±0.00 4.592±0.85 5.087±0.73 7.045±0.00 3.055±0.00 4.961±0.78 3.732±0.00 9.471±0.40
ENST00000556307 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000556373 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000556493 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000556570 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000556805 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000556946 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000557071 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000557095 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 4.809±0.00 N/A N/A N/A
ENST00000557268 N/A N/A 3.466±0.00 N/A N/A N/A 3.326±0.00 2.364±0.00 4.193±0.00 N/A N/A 7.243±0.00 N/A N/A
ENST00000557534 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000557621 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000557714 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000557716 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000561006 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000607042 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000197406 ENST00000510508 2.628±0.00 2.467±0.00 N/A 0.265±0.13 0.131±0.10 1.331±1.11 0.290±0.00 1.095±0.00 0.061±0.02 1.428±0.00 1.028±0.68 5.568±7.02 19.308±11.30 2.624±2.13
ENSG00000207208 ENST00000384479 N/A 0.427±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A 1.025±0.00 N/A 1.436±0.00
ENSG00000241494 ENST00000472981 0.163±0.00 0.172±0.00 N/A 0.035±0.00 0.308±0.00 0.193±0.00 0.121±0.00 0.137±0.00 0.060±0.00 0.318±0.00 0.356±0.00 0.208±0.19 0.330±0.06 0.722±0.00
ENSG00000256705 ENST00000556205 0.270±0.00 1.771±0.00 N/A 0.280±0.00 0.911±0.25 0.449±0.00 0.200±0.00 0.635±0.05 0.284±0.20 0.337±0.00 0.347±0.00 0.314±0.12 N/A 0.492±0.00
ENSG00000258404 ENST00000557778 0.156±0.00 0.113±0.00 N/A 0.568±0.37 N/A N/A N/A N/A N/A N/A N/A 0.387±0.19 N/A 0.118±0.00
ENSG00000258512 ENST00000556973 0.729±0.00 1.087±0.00 N/A 0.031±0.00 N/A 0.295±0.00 N/A 0.146±0.00 0.210±0.18 0.213±0.11 N/A 0.316±0.21 N/A 0.026±0.00
ENSG00000258919 ENST00000553270 0.390±0.00 0.669±0.00 N/A 0.105±0.01 N/A 0.082±0.00 N/A N/A N/A 0.504±0.00 N/A 0.301±0.00 N/A 0.137±0.06
ENSG00000259088 ENST00000554859 0.046±0.00 0.297±0.00 0.134±0.00 0.448±0.36 0.971±0.00 N/A 0.353±0.14 0.323±0.00 N/A 0.053±0.00 N/A 0.594±0.03 0.801±0.18 0.907±0.00
ENSG00000259161 ENST00000553295 0.097±0.00 0.017±0.00 0.104±0.00 0.034±0.00 0.652±0.00 0.245±0.20 0.371±0.00 0.210±0.14 0.200±0.18 0.184±0.00 0.803±0.00 0.566±0.00 0.023±0.00 0.045±0.00
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000017843 ENSMUST00000084985 6.348±0.21 3.281±0.83 8.195±1.42 N/A 4.675±1.09 2.767±1.12 6.404±0.40 3.490±0.92 1.631±0.69 7.742±1.46 5.391±1.45 4.986±2.05 2.586±0.75 22.522±0.65
ENSMUST00000109832 9.702±3.02 5.355±1.90 12.249±1.78 12.737±1.23 5.832±2.68 6.066±1.04 11.391±2.12 4.745±1.59 5.002±2.43 7.232±2.67 6.235±0.54 5.339±2.74 5.387±2.30 55.267±10.98
ENSMUSG00000075707 ENSMUST00000097228 0.373±0.26 N/A 0.125±0.06 1.770±0.71 0.162±0.04 0.268±0.05 0.125±0.04 0.170±0.09 0.060±0.03 0.176±0.00 0.071±0.05 N/A 8.468±3.72 0.091±0.03
ENSMUST00000173014 0.549±0.39 N/A 0.207±0.03 0.855±0.19 0.037±0.00 0.166±0.02 0.052±0.00 0.108±0.04 0.089±0.03 0.096±0.02 0.162±0.08 2.135±1.26 17.531±13.59 0.113±0.06

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