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C-It-Loci: A knowledge database for tissue-enriched loci.
Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main
Transcript Info |
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| Description: | Y box binding protein 1 | |||||
|---|---|---|---|---|---|---|
| Transcript Accession | Transcript Name | Contained in Gene | Tax ID | Strand | Position | Biotype |
ENST00000332220  |
YBX1-004 |
ENSG00000065978 |
9606 | + |
1:42682440-42697262  |
protein_coding |
|
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Expression PatternsNo expression data. |
Conserved Regions | |||
|---|---|---|---|
| Region ID | Sub-Region | Region Type | Position |
| CIL_0008PM | CIL_0008PM_0001 | VISTA | 1:42456139-43057783 |
Gene Ontology | ||
|---|---|---|
| GO ID | Evidence Type | GO Description |
| GO:0003677 | IEA | DNA binding |
| GO:0005737 | IDA | cytoplasm |
| GO:0006355 | IEA | regulation of transcription, DNA-templated |
| GO:0043231 | IDA | intracellular membrane-bounded organelle |
Homologs | |||||
| ENSEMBL Accession | Gene Name | Biotype | Species | E-Value | Bit Score |
|
ENSMUST00000139897
|
Ybx1-003 | processed_transcript | Mus_musculus | 0 | 883 |
|
ENSMUST00000127737
|
Ybx1-004 | protein_coding | Mus_musculus | 0 | 634 |
|
ENSMUST00000079644
|
Ybx1-001 | protein_coding | Mus_musculus | 0 | 634 |
|
ENSMUST00000117567
|
Gm11560-001 | processed_pseudogene | Mus_musculus | 0 | 597 |
|
ENSMUST00000142884
|
Ybx1-005 | processed_transcript | Mus_musculus | 0 | 575 |
|
ENSMUST00000152733
|
Ybx1-002 | processed_transcript | Mus_musculus | 0 | 531 |
|
ENSMUST00000123576
|
E130201H02Rik-001 | processed_pseudogene | Mus_musculus | 0 | 429 |
|
ENSMUST00000144992
|
Ybx1-006 | processed_transcript | Mus_musculus | 0 | 191 |
|
ENSMUST00000119046
|
Gm15808-001 | processed_pseudogene | Mus_musculus | 1.4013e-45 | 187 |
