C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: RIKEN cDNA E130201H02 gene
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000123576 E130201H02Rik-001 ENSMUSG00000044141 10090 + 7:120597625-120598475 processed_pseudogene

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartLiverOvaryPlacentaTestisENSMUST00000123576
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Liver Ovary Placenta Testis
ENSMUST00000123576 0.048±0.00 0.068±0.02 0.017±0.01 0.841±0.57 0.074±0.00 0.069±0.00 0.041±0.00 0.008±0.00 0.111±0.03 0.042±0.03 0.389±0.49

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000007699 YBX2-001 protein_coding Homo_sapiens 5e-38 163
ENST00000321358 YBX1-001 protein_coding Homo_sapiens 0 676
ENST00000332220 YBX1-004 protein_coding Homo_sapiens 0 429
ENST00000436427 YBX1-002 protein_coding Homo_sapiens 0 302
ENST00000442962 YBX1P6-001 processed_pseudogene Homo_sapiens 0 390
ENST00000444752 YBX1P10-001 processed_pseudogene Homo_sapiens 0 503
ENST00000445822 YBX1P1-001 processed_pseudogene Homo_sapiens 0 531
ENST00000467957 YBX1-003 processed_transcript Homo_sapiens 0 392
ENST00000489612 YBX1P2-001 processed_pseudogene Homo_sapiens 0 484
ENST00000560358 RP11-244F12.1-001 processed_pseudogene Homo_sapiens 0 431
ENST00000570627 YBX2-005 processed_transcript Homo_sapiens 0.000000000000001 88
ENST00000571834 YBX2-002 retained_intron Homo_sapiens 0.000000000000004 88
ENST00000605472 RP11-451F14.1-001 processed_pseudogene Homo_sapiens 0 267
ENST00000616651 YBX1-201 protein_coding Homo_sapiens 0 627

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