C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: predicted gene 11560
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000117567 Gm11560-001 ENSMUSG00000086688 10090 + 11:99932162-99933109 processed_pseudogene

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000117567
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000117567 0.093±0.04 0.125±0.04 0.485±0.00 0.290±0.09 0.268±0.26 0.240±0.16 0.500±0.15 0.405±0.18 0.130±0.10 0.097±0.04 0.107±0.04 0.273±0.17 0.333±0.39 1.220±0.28

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000007699 YBX2-001 protein_coding Homo_sapiens 5e-38 163
ENST00000321358 YBX1-001 protein_coding Homo_sapiens 0 1367
ENST00000332220 YBX1-004 protein_coding Homo_sapiens 0 597
ENST00000436427 YBX1-002 protein_coding Homo_sapiens 0 1181
ENST00000442962 YBX1P6-001 processed_pseudogene Homo_sapiens 0 990
ENST00000444752 YBX1P10-001 processed_pseudogene Homo_sapiens 0 1249
ENST00000445822 YBX1P1-001 processed_pseudogene Homo_sapiens 0 1304
ENST00000467957 YBX1-003 processed_transcript Homo_sapiens 0 835
ENST00000468366 YBX1P3-001 processed_pseudogene Homo_sapiens 0 593
ENST00000489612 YBX1P2-001 processed_pseudogene Homo_sapiens 0 1194
ENST00000509441 YBX1P5-001 processed_pseudogene Homo_sapiens 0 265
ENST00000560358 RP11-244F12.1-001 processed_pseudogene Homo_sapiens 0 1074
ENST00000570627 YBX2-005 processed_transcript Homo_sapiens 0.000000000000001 88
ENST00000571834 YBX2-002 retained_intron Homo_sapiens 0.000000000000004 88
ENST00000605472 RP11-451F14.1-001 processed_pseudogene Homo_sapiens 0 333
ENST00000616651 YBX1-201 protein_coding Homo_sapiens 0 1256

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