C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: predicted gene 15808
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000119046 Gm15808-001 ENSMUSG00000083536 10090 + 16:14067403-14068006 processed_pseudogene

Mus musculus EnsemblGRCm38

Genome
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Genes
Structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; BrainENSMUST00000119046
Transcript ID Brain
ENSMUST00000119046 1.216±1.33

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0006UU CIL_0006UU_0002 CGP 16:13986604-14159274

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000007699 YBX2-001 protein_coding Homo_sapiens 1e-28 132
ENST00000321358 YBX1-001 protein_coding Homo_sapiens 0 516
ENST00000332220 YBX1-004 protein_coding Homo_sapiens 1.4013e-45 187
ENST00000436427 YBX1-002 protein_coding Homo_sapiens 0 383
ENST00000442962 YBX1P6-001 processed_pseudogene Homo_sapiens 0 412
ENST00000444752 YBX1P10-001 processed_pseudogene Homo_sapiens 0 505
ENST00000445822 YBX1P1-001 processed_pseudogene Homo_sapiens 0 472
ENST00000467957 YBX1-003 processed_transcript Homo_sapiens 0 479
ENST00000468366 YBX1P3-001 processed_pseudogene Homo_sapiens 0 265
ENST00000489612 YBX1P2-001 processed_pseudogene Homo_sapiens 0 451
ENST00000560358 RP11-244F12.1-001 processed_pseudogene Homo_sapiens 0 411
ENST00000570627 YBX2-005 processed_transcript Homo_sapiens 0.0000000001 71
ENST00000571834 YBX2-002 retained_intron Homo_sapiens 0.0000000004 71
ENST00000605472 RP11-451F14.1-001 processed_pseudogene Homo_sapiens 0 300
ENST00000616651 YBX1-201 protein_coding Homo_sapiens 0 518

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