C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: G patch domain containing 8
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000335500 GPATCH8-003 ENSG00000186566 9606 - 17:44395284-44465935 retained_intron

Expression Patterns

Heat Map
Numeric Values
Transcript'; BladderBreastColonHeartLiverLungENST00000335500
Transcript ID Bladder Breast Colon Heart Liver Lung
ENST00000335500 1.392±0.00 0.785±0.00 0.987±0.00 0.302±0.00 0.986±0.00 1.348±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0009B6 CIL_0009B6_0001 VISTA 17:43966083-44567774
CIL_0007ST CIL_0007ST_0001 VISTA 17:44247434-44848646
CIL_0005IZ CIL_0005IZ_0001 CGP 17:44372180-44503430

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000143842 Gpatch8-001 protein_coding Mus_musculus 0 6170
ENSMUST00000069673 Gpatch8-002 processed_transcript Mus_musculus 0 5397
ENSMUST00000126804 Gpatch8-004 processed_transcript Mus_musculus 0 276
ENSMUST00000131573 Gpatch8-005 processed_transcript Mus_musculus 4e-35 156

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