C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: RasGEF domain family, member 1B
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000335927 RASGEF1B-005 ENSG00000138670 9606 - 4:81427449-81471904 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; HeartKidneyLiverLungOvaryPlacentaENST00000335927
Transcript ID Heart Kidney Liver Lung Ovary Placenta
ENST00000335927 0.165±0.00 3.930±0.00 0.775±0.00 3.525±0.46 0.647±0.03 2.681±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_000086 CIL_000086_0002 CGP 4:81087370-82044244
CIL_0008G8 CIL_0008G8_0001 VISTA 4:81293869-81895630

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005085 IEA guanyl-nucleotide exchange factor activity
GO:0005088 IDA Ras guanyl-nucleotide exchange factor activity
GO:0005768 IEA endosome
GO:0007264 IEA small GTPase mediated signal transduction
GO:0032320 IDA positive regulation of Ras GTPase activity
GO:0043547 IEA positive regulation of GTPase activity

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000166484 Rasgef1b-003 protein_coding Mus_musculus 0 1513
ENSMUST00000168092 Rasgef1b-002 protein_coding Mus_musculus 0 1399
ENSMUST00000031276 Rasgef1b-001 protein_coding Mus_musculus 0 1391

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