C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: polycomb group ring finger 5
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000336126 PCGF5-001 ENSG00000180628 9606 + 10:91220788-91284331 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBreastHeartKidneyLungOvaryPlacentaTestisENST00000336126
Transcript ID Adipose Adrenal Breast Heart Kidney Lung Ovary Placenta Testis
ENST00000336126 5.140±0.00 1.347±0.00 1.856±0.00 3.047±0.00 1.510±0.00 1.601±0.00 2.127±0.28 1.524±0.33 5.389±2.11

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0008BY CIL_0008BY_0001 VISTA 10:90630264-91230917
CIL_0001IQ CIL_0001IQ_0001 CGP 10:90912096-91284331
CIL_00018O CIL_00018O_0001 CGP 10:91163012-91514829

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005515 IPI:IEA protein binding
GO:0005634 IDA nucleus
GO:0005730 IDA nucleolus
GO:0005813 IDA centrosome
GO:0006351 IEA transcription, DNA-templated
GO:0006355 IEA regulation of transcription, DNA-templated
GO:0008270 IEA zinc ion binding
GO:0031519 IDA PcG protein complex
GO:0046872 IEA metal ion binding

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000062389 Pcgf5-201 protein_coding Mus_musculus 0 902
ENSMUST00000071267 Pcgf5-202 protein_coding Mus_musculus 0 896

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