C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: zinc finger CCCH-type containing 15
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000337859 ZC3H15-001 ENSG00000065548 9606 + 2:186486156-186509363 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000337859
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000337859 13.886±0.00 19.400±0.00 2.359±0.00 18.094±6.42 12.545±3.28 16.574±9.79 6.237±4.32 14.754±7.62 9.800±4.42 11.098±3.49 8.100±6.21 29.039±15.55 17.143±8.87 28.175±4.34

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0000Q4 CIL_0000Q4_0001 CGP 2:185738628-186509363
CIL_0002DB CIL_0002DB_0001 CGP 2:186486156-186680901

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005515 IPI protein binding
GO:0005634 IDA nucleus
GO:0005730 IDA nucleolus
GO:0005737 IDA cytoplasm
GO:0019221 IEA cytokine-mediated signaling pathway
GO:0044822 IDA poly(A) RNA binding
GO:0046872 IEA metal ion binding

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000081591 Zc3h15-001 protein_coding Mus_musculus 0 2235
ENSMUST00000119768 Gm5909-001 processed_pseudogene Mus_musculus 0 1668
ENSMUST00000134789 Zc3h15-003 processed_transcript Mus_musculus 0 1351
ENSMUST00000130948 Zc3h15-002 processed_transcript Mus_musculus 0 691
ENSMUST00000140086 Zc3h15-007 processed_transcript Mus_musculus 0 593
ENSMUST00000125422 Zc3h15-006 processed_transcript Mus_musculus 0 527
ENSMUST00000142756 Zc3h15-004 processed_transcript Mus_musculus 0 298

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