C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: islet cell autoantigen 1, 69kDa
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000339809 ICA1-004 ENSG00000003147 9606 - 7:8113772-8262527 nonsense_mediated_decay

Expression Patterns

Heat Map
Numeric Values
Transcript'; BreastColonHeartLiverLungMuscleOvaryPlacentaENST00000339809
Transcript ID Breast Colon Heart Liver Lung Muscle Ovary Placenta
ENST00000339809 3.542±0.00 1.770±0.00 3.286±0.00 2.597±0.00 1.780±0.57 0.073±0.00 2.752±0.23 1.952±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0002EL CIL_0002EL_0001 CGP 7:7968794-8262687
CIL_0002VG CIL_0002VG_0001 CGP 7:8113184-8752963

Gene Ontology

GO IDEvidence TypeGO Description
GO:0019904 IEA protein domain specific binding

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000115518 Ica1-002 protein_coding Mus_musculus 0 1011
ENSMUST00000038403 Ica1-001 protein_coding Mus_musculus 0 985
ENSMUST00000115519 Ica1-006 protein_coding Mus_musculus 0 985
ENSMUST00000153390 Ica1-005 protein_coding Mus_musculus 0 979
ENSMUST00000115520 Ica1-004 protein_coding Mus_musculus 0 979
ENSMUST00000156695 Ica1-007 nonsense_mediated_decay Mus_musculus 0 931
ENSMUST00000135113 Ica1-003 processed_transcript Mus_musculus 0 839
ENSMUST00000126430 Ica1-010 protein_coding Mus_musculus 0 289

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