C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_0002VG_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000003147-ENSG00000122584 CGP 9606 7:8113184-8752963
GeneTranscriptPositionBiotype
ENSG00000003147 (ICA1)
islet cell autoantigen 1, 69kDa 		ENST00000265577 (ICA1-002) 8113255-8262206 protein_coding
ENST00000317367 (ICA1-008) 8157116-8236894 protein_coding
ENST00000339809 (ICA1-004) 8113772-8262527 nonsense_mediated_decay
ENST00000396675 (ICA1-007) 8113309-8262052 protein_coding
ENST00000401396 (ICA1-006) 8113779-8236894 protein_coding
ENST00000402384 (ICA1-001) 8113184-8262281 protein_coding
ENST00000406470 (ICA1-201) 8113187-8262612 protein_coding
ENST00000407906 (ICA1-003) 8156557-8262612 protein_coding
ENST00000422063 (ICA1-202) 8113923-8235926 protein_coding
ENST00000430867 (ICA1-009) 8218479-8262069 protein_coding
ENST00000446305 (ICA1-012) 8228642-8262687 protein_coding
ENST00000447326 (ICA1-011) 8218398-8262543 protein_coding
ENST00000455539 (ICA1-005) 8113772-8262153 nonsense_mediated_decay
ENST00000457755 (ICA1-014) 8221353-8262170 nonsense_mediated_decay
ENST00000470696 (ICA1-013) 8141765-8157764 retained_intron
ENST00000476942 (ICA1-015) 8218441-8218951 processed_transcript
ENST00000486677 (ICA1-010) 8127873-8262145 processed_transcript
ENST00000490041 (ICA1-016) 8158331-8218459 retained_intron
ENSG00000122584 (NXPH1)
neurexophilin 1 		ENST00000405863 (NXPH1-001) 8433955-8752963 protein_coding
ENST00000429542 (NXPH1-004) 8435195-8751383 protein_coding
ENST00000438764 (NXPH1-003) 8435063-8751371 protein_coding
ENST00000497400 (NXPH1-002) 8690287-8751987 processed_transcript
ENST00000602349 (NXPH1-201) 8751007-8752959 protein_coding
ENSG00000265212 (AC007009.2)
 ENST00000577980 (AC007009.2-201) 8154916-8155027 miRNA
CIL_0002VG_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000062995-ENSMUSG00000046178 CGP 10090 6:8630527-9249032
GeneTranscriptPositionBiotype
ENSMUSG00000046178 (Nxph1)
neurexophilin 1 		ENSMUST00000060369 (Nxph1-002) 8949676-9249030 protein_coding
ENSMUST00000160300 (Nxph1-001) 8948614-9249032 protein_coding
ENSMUST00000162942 (Nxph1-003) 8948431-8952430 processed_transcript
ENSMUSG00000062995 (Ica1)
islet cell autoantigen 1 		ENSMUST00000038403 (Ica1-001) 8630527-8778484 protein_coding
ENSMUST00000115518 (Ica1-002) 8659001-8778487 protein_coding
ENSMUST00000115519 (Ica1-006) 8630527-8778154 protein_coding
ENSMUST00000115520 (Ica1-004) 8630527-8778439 protein_coding
ENSMUST00000126039 (Ica1-009) 8749729-8770540 protein_coding
ENSMUST00000126430 (Ica1-010) 8659002-8737097 protein_coding
ENSMUST00000127398 (Ica1-011) 8658991-8672317 protein_coding
ENSMUST00000135113 (Ica1-003) 8730440-8778488 processed_transcript
ENSMUST00000145870 (Ica1-012) 8630699-8647819 processed_transcript
ENSMUST00000151758 (Ica1-008) 8754634-8778123 protein_coding
ENSMUST00000153390 (Ica1-005) 8658284-8778154 protein_coding
ENSMUST00000156695 (Ica1-007) 8630527-8758399 nonsense_mediated_decay

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0002VG_0001ENSG00000003147ENST00000265577ENST00000317367ENST00000339809ENST00000396675ENST00000401396ENST00000402384ENST00000406470ENST00000407906ENST00000422063ENST00000430867ENST00000446305ENST00000447326ENST00000455539ENST00000457755ENST00000470696ENST00000476942ENST00000486677ENST00000490041ENSG00000122584ENST00000405863ENST00000429542ENST00000438764ENST00000497400ENST00000602349ENSG00000265212ENST00000577980CIL_0002VG_0002ENSMUSG00000046178ENSMUST00000060369ENSMUST00000160300ENSMUST00000162942ENSMUSG00000062995ENSMUST00000038403ENSMUST00000115518ENSMUST00000115519ENSMUST00000115520ENSMUST00000126039ENSMUST00000126430ENSMUST00000127398ENSMUST00000135113ENSMUST00000145870ENSMUST00000151758ENSMUST00000153390ENSMUST00000156695
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0002VG_0001ENSG00000003147ENST00000265577ENST00000317367ENST00000339809ENST00000396675ENST00000401396ENST00000402384ENST00000406470ENST00000407906ENST00000422063ENST00000455539ENST00000470696ENST00000486677ENST00000490041ENSG00000122584ENST00000405863ENST00000438764ENST00000497400ENST00000602349ENSG00000265212ENST00000577980CIL_0002VG_0002ENSMUSG00000046178ENSMUST00000060369ENSMUST00000160300ENSMUST00000162942ENSMUSG00000062995ENSMUST00000038403ENSMUST00000115519ENSMUST00000115520ENSMUST00000126039ENSMUST00000126430ENSMUST00000145870ENSMUST00000153390ENSMUST00000156695
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000003147 ENST00000265577 N/A 1.922±0.00 N/A 2.267±0.00 N/A N/A 1.583±0.25 N/A 0.881±0.00 N/A N/A 1.737±0.00 0.997±0.70 N/A
ENST00000317367 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.424±0.00 N/A N/A N/A
ENST00000339809 N/A N/A N/A N/A 3.542±0.00 1.770±0.00 3.286±0.00 N/A 2.597±0.00 1.780±0.57 0.073±0.00 2.752±0.23 1.952±0.00 N/A
ENST00000396675 2.660±0.00 N/A N/A 6.148±0.00 2.223±0.00 1.558±0.00 3.041±0.00 5.220±0.00 2.838±0.00 1.372±0.00 N/A 8.880±6.74 0.999±0.22 N/A
ENST00000401396 4.182±0.00 N/A N/A N/A 3.512±0.00 N/A 4.374±0.00 0.698±0.00 2.438±0.00 1.173±0.00 N/A N/A 1.422±0.00 N/A
ENST00000402384 N/A N/A N/A N/A N/A 1.896±0.00 N/A N/A N/A N/A N/A N/A 0.876±0.40 N/A
ENST00000406470 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 2.685±0.00 N/A N/A
ENST00000407906 N/A N/A N/A N/A 1.854±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000422063 N/A N/A N/A N/A N/A 1.077±0.00 N/A 3.607±0.00 N/A 0.940±0.00 0.761±0.00 8.021±0.00 0.736±0.00 N/A
ENST00000430867 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000446305 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000447326 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000455539 3.387±0.00 3.403±0.00 2.044±0.00 3.978±0.00 2.606±0.48 1.536±0.79 2.194±0.53 2.971±0.00 1.005±0.53 1.311±0.00 N/A 4.944±0.00 N/A 7.287±0.00
ENST00000457755 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000470696 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.279±0.00 15.344±0.00 N/A N/A
ENST00000476942 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000486677 23.368±0.00 18.440±0.00 N/A N/A 27.497±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000490041 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 39.299±0.00
ENSG00000122584 ENST00000405863 N/A N/A N/A 1.874±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000429542 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000438764 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.223±0.00
ENST00000497400 N/A N/A N/A N/A 0.404±0.00 N/A N/A N/A N/A N/A N/A N/A 0.046±0.00 N/A
ENST00000602349 N/A N/A N/A 2.214±0.07 N/A N/A N/A N/A 0.035±0.00 N/A N/A 0.011±0.00 0.018±0.00 0.028±0.00
ENSG00000265212 ENST00000577980 0.415±0.00 0.134±0.00 N/A 0.382±0.00 N/A N/A N/A N/A N/A N/A N/A N/A 2.663±0.00 N/A
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000046178 ENSMUST00000060369 0.069±0.04 0.135±0.04 0.178±0.01 3.782±2.30 0.135±0.07 0.068±0.03 0.011±0.00 0.062±0.00 0.015±0.01 0.094±0.03 0.040±0.00 0.078±0.06 0.014±0.00 0.134±0.06
ENSMUST00000160300 0.042±0.00 0.257±0.11 0.099±0.00 6.696±1.48 0.118±0.08 0.055±0.01 N/A 0.064±0.03 0.021±0.00 0.019±0.00 N/A 0.055±0.00 0.021±0.00 0.502±0.24
ENSMUST00000162942 N/A 0.161±0.07 N/A N/A 0.055±0.03 0.043±0.00 N/A N/A 0.013±0.01 N/A N/A 0.021±0.00 N/A 0.177±0.02
ENSMUSG00000062995 ENSMUST00000038403 0.865±0.31 1.133±0.34 6.475±2.45 5.305±0.53 0.172±0.00 1.392±0.39 1.143±0.16 0.739±0.39 1.112±0.80 1.096±0.41 0.437±0.23 0.309±0.10 1.075±0.55 N/A
ENSMUST00000115518 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000115519 0.670±0.32 1.055±0.29 N/A N/A 0.468±0.17 N/A N/A 0.710±0.00 0.506±0.40 1.547±0.53 0.366±0.19 1.208±0.49 1.645±1.20 N/A
ENSMUST00000115520 N/A 0.865±0.22 N/A N/A 0.876±0.06 2.134±0.17 N/A N/A N/A 3.199±0.26 N/A 0.624±0.15 N/A N/A
ENSMUST00000126039 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 99.650±0.00
ENSMUST00000126430 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 1.776±0.00 N/A N/A
ENSMUST00000127398 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000135113 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000145870 N/A 2.961±0.80 N/A N/A 0.922±0.10 3.193±0.25 N/A 1.343±0.44 0.308±0.14 N/A N/A 1.195±0.36 N/A N/A
ENSMUST00000151758 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000153390 0.800±0.00 N/A N/A N/A 0.825±0.12 N/A N/A N/A 0.206±0.00 N/A N/A 1.399±0.52 N/A N/A
ENSMUST00000156695 N/A 1.110±0.00 N/A N/A 0.466±0.00 N/A N/A N/A 0.205±0.14 N/A 0.252±0.05 0.340±0.00 N/A N/A

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